Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MFSD8-233ENST00000641482 4860 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 CCT4P2-201ENST00000233836 1548 ntBASIC4.11□□□□□ -1.75
SYNE3Q6ZMZ3 AC091152.2-201ENST00000591628 2569 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC244517.1-201ENST00000606030 2086 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 RNU6-263P-201ENST00000363811 107 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 SNORD116-4-201ENST00000384733 96 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AL583834.1-201ENST00000406943 343 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 RPS7P15-201ENST00000415804 584 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC006366.1-201ENST00000422002 759 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 CYCSP43-201ENST00000438233 310 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC108734.1-201ENST00000439549 399 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AL357552.1-201ENST00000445254 415 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC104308.1-201ENST00000454621 333 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 snoU13.8-201ENST00000458890 104 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 MTND4P2-201ENST00000507767 1203 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC026784.1-201ENST00000507986 352 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 SNORA70.19-201ENST00000516717 90 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC026403.1-201ENST00000518938 295 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AP002963.1-201ENST00000530590 184 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AP000873.5-201ENST00000533906 236 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC092140.2-201ENST00000618027 521 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC093591.3-201ENST00000634516 308 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 AC090582.1-201ENST00000636321 199 ntBASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SYNE3Q6ZMZ3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 RNU6-623P-201ENST00000363143 105 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 Y_RNA.548-201ENST00000384656 105 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 RNY3P10-201ENST00000384764 102 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 RPS29P4-201ENST00000414733 161 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 BX842559.1-201ENST00000419615 532 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 THAP5P1-201ENST00000439089 262 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 RPL7P36-201ENST00000444633 681 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 HMGN2P21-201ENST00000447764 270 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 RPS4XP10-201ENST00000465034 731 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 FCF1P3-201ENST00000496394 590 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 MTCO3P7-201ENST00000510008 774 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 RN7SKP13-201ENST00000515933 244 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC025881.1-201ENST00000518851 512 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 MIR5697-201ENST00000578045 78 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC055876.5-201ENST00000605667 259 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC243312.2-201ENST00000623340 601 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AL603839.4-201ENST00000624658 1005 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC112200.1-201ENST00000625015 234 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 AC138915.3-201ENST00000562908 1389 ntBASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYNE3Q6ZMZ3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
SYNE3Q6ZMZ3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SYNE3Q6ZMZ3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SYNE3Q6ZMZ3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SYNE3Q6ZMZ3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SYNE3Q6ZMZ3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms