Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 RPS15AP6-201ENST00000420703 385 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 LSM1P1-201ENST00000438629 273 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 RPS3AP46-201ENST00000448352 682 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AP000542.1-201ENST00000448473 371 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC104978.1-201ENST00000449387 391 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 RBMY2UP-201ENST00000453474 324 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AL359385.1-201ENST00000456509 365 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 RPS20P20-201ENST00000460498 340 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 RN7SL594P-201ENST00000470590 287 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC111000.2-201ENST00000507775 550 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 LTV1P1-201ENST00000510683 1237 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 SNORA70.18-201ENST00000516696 98 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 RNU1-45P-201ENST00000517191 141 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 IGHV3-76-201ENST00000522465 295 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 MTATP6P15-201ENST00000527233 835 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 MIR3944-201ENST00000581277 108 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC060771.1-201ENST00000582031 164 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 MIR3158-1-201ENST00000583596 81 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC008739.3-201ENST00000603262 127 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AL607023.1-201ENST00000620045 248 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 MIR6075-201ENST00000620782 95 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC027309.3-201ENST00000623419 351 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 OR8B1P-202ENST00000641132 1178 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC009093.8-201ENST00000641769 292 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AL355596.1-201ENST00000565399 3996 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 MFSD8-233ENST00000641482 4860 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 AC012321.1-201ENST00000561622 1588 ntBASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.17□□□□□ -1.9
NHLRC1Q6VVB1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 SNORD113-6-201ENST00000363345 75 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 SNORA73.2-201ENST00000364946 201 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 MIR514A1-201ENST00000385133 98 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC119751.3-201ENST00000399720 670 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AL359704.1-201ENST00000411586 781 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC092447.3-201ENST00000426027 686 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AL158071.1-201ENST00000430315 461 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC007389.2-201ENST00000434630 306 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 SNORD105B-201ENST00000458770 79 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 RNU6-420P-201ENST00000458780 107 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 ACTR3P3-201ENST00000480448 893 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 RPL23AP41-201ENST00000484754 458 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AL049874.1-201ENST00000489560 388 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC021678.1-201ENST00000505195 936 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 SNORA67.7-201ENST00000516664 135 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 RNU6-798P-201ENST00000516912 103 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AP004247.1-201ENST00000531556 1289 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 ELOCP32-201ENST00000548625 324 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 DUXAP6-201ENST00000553858 601 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 ISCA1P3-201ENST00000577104 373 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 MIR4999-201ENST00000585029 91 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC067852.3-201ENST00000589177 561 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC103710.1-201ENST00000610003 901 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC093838.1-201ENST00000613014 469 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC022149.2-201ENST00000621061 203 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AL357559.1-201ENST00000622228 274 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AP000676.3-201ENST00000623299 569 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AC004777.1-201ENST00000624317 287 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 AP000676.4-201ENST00000624659 623 ntBASIC3.16□□□□□ -1.9
NHLRC1Q6VVB1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms