Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AL035410.1-201ENST00000427409 427 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 OR51AB1P-201ENST00000429046 620 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 AL356276.2-201ENST00000435919 558 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 RPL7P54-201ENST00000438336 674 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 AL049734.2-201ENST00000441066 616 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 HSPE1P28-201ENST00000443139 211 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT40Q6A162 RPL5P30-201ENST00000465511 891 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AC023194.1-201ENST00000493084 308 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AC093677.1-201ENST00000514414 678 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 PDCD5P1-201ENST00000543528 309 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 DYNLL1P4-201ENST00000549314 266 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AL138976.2-201ENST00000563989 694 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 AC022968.1-201ENST00000567372 442 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 AC025627.2-201ENST00000576220 160 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 MIR4504-201ENST00000577413 92 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AL139395.1-201ENST00000603662 160 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AL356585.4-201ENST00000623078 1229 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRT40Q6A162 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT40Q6A162 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AC087190.4-201ENST00000574616 8334 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT40Q6A162 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT40Q6A162 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
KRT40Q6A162 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRT40Q6A162 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRT40Q6A162 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRT40Q6A162 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT40Q6A162 SNORD56.2-201ENST00000363242 71 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 RNY3P3-201ENST00000363816 102 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 RNU6-359P-201ENST00000365466 108 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
KRT40Q6A162 RPS4XP8-201ENST00000402039 771 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC099336.2-201ENST00000422457 254 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 MTCO2P5-201ENST00000422621 426 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC092832.1-201ENST00000422934 400 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC069285.2-201ENST00000440210 275 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 RPS20P32-201ENST00000456044 356 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC099560.2-201ENST00000457554 255 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 RPL36AP51-201ENST00000487216 318 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC025445.1-201ENST00000502728 300 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 FTH1P24-201ENST00000503502 462 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.67□□□□□ -1.66
KRT40Q6A162 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT40Q6A162 RNU6-835P-201ENST00000516974 104 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 HIF1AP1-201ENST00000553642 175 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT40Q6A162 AL359212.1-201ENST00000556608 614 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT40Q6A162 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT40Q6A162 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.67□□□□□ -1.66
KRT40Q6A162 UBE2L4-201ENST00000587688 464 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AL162413.1-201ENST00000603198 110 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC011468.4-201ENST00000603942 409 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC087045.1-201ENST00000605856 382 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AL158801.5-201ENST00000623123 465 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 CYP3A51P-201ENST00000633513 256 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC024614.3-201ENST00000637860 256 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRT40Q6A162 MTND5P33-201ENST00000571250 1450 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 AC106871.1-201ENST00000568324 3102 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRT40Q6A162 AC092447.10-201ENST00000620607 1652 ntBASIC4.67□□□□□ -1.66
KRT40Q6A162 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRT40Q6A162 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.66□□□□□ -1.66
KRT40Q6A162 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
KRT40Q6A162 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRT40Q6A162 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRT40Q6A162 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.66□□□□□ -1.66
KRT40Q6A162 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRT40Q6A162 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.66□□□□□ -1.66
KRT40Q6A162 MIR483-201ENST00000385070 76 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 RPL31P1-201ENST00000398116 372 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 RNU2-21P-201ENST00000410368 188 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 RNA5SP104-201ENST00000410989 118 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 HSPE1P12-201ENST00000412576 301 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.66□□□□□ -1.66
KRT40Q6A162 AC007283.2-201ENST00000424739 197 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC011742.1-201ENST00000431448 434 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.66□□□□□ -1.66
KRT40Q6A162 PABPC1P3-201ENST00000469174 459 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC010587.1-201ENST00000505809 469 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.66□□□□□ -1.66
KRT40Q6A162 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.66□□□□□ -1.66
KRT40Q6A162 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.66□□□□□ -1.66
KRT40Q6A162 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.66□□□□□ -1.66
KRT40Q6A162 HSPE1P5-201ENST00000561489 272 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC034105.3-201ENST00000565294 442 ntBASIC4.66□□□□□ -1.66
KRT40Q6A162 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.66□□□□□ -1.66
KRT40Q6A162 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.66□□□□□ -1.66
KRT40Q6A162 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms