Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AC006566.1-201ENST00000608943 513 ntBASIC3.62□□□□□ -1.83
SGO1Q5FBB7 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.62□□□□□ -1.83
SGO1Q5FBB7 AL391261.4-201ENST00000616012 481 ntBASIC3.62□□□□□ -1.83
SGO1Q5FBB7 ZYXP1-201ENST00000617638 118 ntBASIC3.62□□□□□ -1.83
SGO1Q5FBB7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.62□□□□□ -1.83
SGO1Q5FBB7 FP236240.3-201ENST00000623061 327 ntBASIC3.62□□□□□ -1.83
SGO1Q5FBB7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SGO1Q5FBB7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SGO1Q5FBB7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SGO1Q5FBB7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.62□□□□□ -1.83
SGO1Q5FBB7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 SNORA7.2-201ENST00000364446 145 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RNA5SP235-201ENST00000365411 114 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RNU6-348P-201ENST00000384386 107 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RNU6-297P-201ENST00000384636 107 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 CCNG1P1-201ENST00000406783 885 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RNU6-248P-201ENST00000410720 107 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 HMGB3P23-201ENST00000414981 585 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RPL21P109-201ENST00000422213 475 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC073614.1-201ENST00000438690 650 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RABEPKP1-201ENST00000440529 1026 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC244505.5-201ENST00000443639 207 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RPL21P89-201ENST00000444021 467 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RAC1P7-201ENST00000445367 377 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC010460.1-201ENST00000507087 466 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 CDC42P4-201ENST00000510507 563 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 MED28P5-201ENST00000528254 438 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 HIGD1AP5-201ENST00000529959 259 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC123904.2-201ENST00000548059 300 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 PARP1P2-201ENST00000556806 195 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AL356432.3-201ENST00000568952 465 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 OR4K8P-201ENST00000578842 1048 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 NDUFA8P1-201ENST00000605525 367 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AL355472.4-201ENST00000610233 626 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 BX664608.1-201ENST00000610519 487 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC012150.2-201ENST00000621300 544 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC244258.1-201ENST00000637553 1071 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC099654.13-201ENST00000639774 207 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SGO1Q5FBB7 FARSBP1-201ENST00000435808 1778 ntBASIC3.61□□□□□ -1.83
SGO1Q5FBB7 AC073073.2-201ENST00000609827 2578 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 RNU4-75P-201ENST00000364621 146 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 RNU6-637P-201ENST00000384050 107 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 MIR30B-201ENST00000384850 88 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 RNA5SP424-201ENST00000390988 115 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 SOD2P1-201ENST00000396543 562 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 SNORA3.3-201ENST00000408712 125 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 Y_RNA.625-201ENST00000411256 107 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 RNU6-516P-201ENST00000411381 104 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 RSL24D1P6-201ENST00000426934 401 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 MTND1P34-201ENST00000438556 671 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 AL022238.1-201ENST00000442557 355 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.6□□□□□ -1.83
SGO1Q5FBB7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.6□□□□□ -1.83
SGO1Q5FBB7 Y_RNA.672-201ENST00000516289 104 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms