Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 SULT1C2P1-202ENST00000562418 459 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 ELOCP29-201ENST00000588193 334 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC245036.5-201ENST00000596330 847 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 RPL23AP78-201ENST00000599928 470 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 DUXAP4-201ENST00000603046 613 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC009974.1-201ENST00000608881 455 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AL138478.1-201ENST00000612252 832 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AP003485.2-201ENST00000623636 610 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 MTND5P7-201ENST00000413558 1798 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 DBF4P1-201ENST00000412976 1892 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-799P-201ENST00000363567 107 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-173P-201ENST00000364215 104 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AL133384.1-201ENST00000412744 351 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC092648.1-201ENST00000425870 423 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC087499.2-201ENST00000432861 149 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 USP9YP22-201ENST00000438971 294 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 EEF1A1P39-201ENST00000440791 250 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 VN1R10P-201ENST00000447106 875 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AL590664.1-201ENST00000448065 339 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 NIPA2P5-201ENST00000452282 464 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 RPS27P29-201ENST00000463110 252 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 GTF2IP9-201ENST00000502460 301 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC034159.1-201ENST00000513885 583 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 RNA5SP380-201ENST00000517190 98 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-1261P-201ENST00000517194 104 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC245884.10-201ENST00000597355 337 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC007619.2-201ENST00000605743 379 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC004832.5-201ENST00000608677 401 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC009570.1-201ENST00000609599 745 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC024257.5-201ENST00000612739 531 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC009318.4-201ENST00000620496 486 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC073348.1-201ENST00000623002 331 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 OR4G3P-201ENST00000633500 913 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 MKKS-204ENST00000639674 192 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 AC099654.7-201ENST00000635788 2127 ntBASIC3.37□□□□□ -1.87
SHROOM1Q2M3G4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 NACA3P-201ENST00000359690 648 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-730P-201ENST00000383954 104 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC092155.2-201ENST00000454675 477 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 DUXAP8-207ENST00000456786 622 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 RPS20P24-201ENST00000457473 361 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC092798.1-201ENST00000458542 409 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 HMGB1P25-201ENST00000468402 607 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 RN7SL429P-201ENST00000479090 223 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 RN7SL489P-201ENST00000486185 223 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 RN7SL327P-201ENST00000488659 223 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-1225P-201ENST00000516336 65 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 RN7SKP282-201ENST00000516824 299 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC078899.3-201ENST00000599065 212 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 XIAPP1-201ENST00000603162 600 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AL035413.2-201ENST00000604801 525 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC055876.5-201ENST00000605667 259 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 DUXAP10-204ENST00000612052 616 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC231759.1-201ENST00000616455 597 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 RN7SL853P-201ENST00000617250 223 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC040168.1-201ENST00000623594 991 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AL078595.3-201ENST00000623815 1166 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 OR1S1-201ENST00000624470 978 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC091564.4-201ENST00000533934 2194 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 AC107982.1-201ENST00000507171 1300 ntBASIC3.36□□□□□ -1.87
SHROOM1Q2M3G4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms