Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.94□□□□□ -1.62
SSRP1Q08945 HLA-N-201ENST00000437516 135 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 MTND4P25-201ENST00000441039 533 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 SNRPEP8-201ENST00000442866 260 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AL162389.1-201ENST00000449233 177 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AC126389.1-201ENST00000477436 290 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 RNA5SP49-201ENST00000516450 115 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AC100870.1-201ENST00000522035 505 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AC018630.1-201ENST00000541376 925 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.94□□□□□ -1.62
SSRP1Q08945 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AL034351.1-201ENST00000605288 668 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 RMST_3.1-201ENST00000611651 109 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.94□□□□□ -1.62
SSRP1Q08945 TUG1_2.1-201ENST00000614234 87 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 AC243312.2-201ENST00000623340 601 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
SSRP1Q08945 AC006020.1-201ENST00000420179 1854 ntBASIC4.94□□□□□ -1.62
SSRP1Q08945 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSRP1Q08945 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
SSRP1Q08945 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSRP1Q08945 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SSRP1Q08945 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SSRP1Q08945 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 RNU1-132P-201ENST00000364300 164 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 MIR124-3-201ENST00000384866 87 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AL354719.1-201ENST00000406535 843 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 RPL21P24-201ENST00000413752 448 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 MTATP6P16-201ENST00000434543 526 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC098614.3-201ENST00000438957 440 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 CACYBPP2-201ENST00000453625 678 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 SNORD97-201ENST00000459187 142 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC006512.1-201ENST00000468816 291 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 RPS27AP1-201ENST00000475545 471 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC078785.3-201ENST00000476607 425 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC041039.1-201ENST00000485656 536 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 RN7SL691P-201ENST00000494487 301 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC008628.2-201ENST00000502605 298 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC116562.3-201ENST00000506136 177 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AL592156.1-201ENST00000508758 304 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC093840.1-201ENST00000511599 336 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC046134.1-201ENST00000514454 666 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 RNA5SP401-201ENST00000515920 127 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 RNA5SP519-201ENST00000516480 119 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC068587.5-201ENST00000528506 175 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.93□□□□□ -1.62
SSRP1Q08945 AC123904.3-201ENST00000547218 814 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.93□□□□□ -1.62
SSRP1Q08945 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.93□□□□□ -1.62
SSRP1Q08945 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.93□□□□□ -1.62
SSRP1Q08945 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.93□□□□□ -1.62
SSRP1Q08945 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 AC010591.1-201ENST00000603941 649 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 BNIP3P10-201ENST00000605360 577 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 HMGN2P28-201ENST00000606102 262 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC069234.5-201ENST00000611056 416 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 MIR378J-201ENST00000611988 109 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 AC116667.1-201ENST00000604855 2072 ntBASIC4.93□□□□□ -1.62
SSRP1Q08945 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSRP1Q08945 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SSRP1Q08945 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.93□□□□□ -1.62
SSRP1Q08945 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SSRP1Q08945 MTND4P12-201ENST00000498999 1377 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.92□□□□□ -1.62
SSRP1Q08945 AL356489.2-201ENST00000566968 3528 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.92□□□□□ -1.62
SSRP1Q08945 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSRP1Q08945 CBX3P1-201ENST00000325243 554 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AC073343.1-201ENST00000328239 651 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 RNU6-1284P-201ENST00000363701 100 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 Y_RNA.255-201ENST00000364581 97 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 RNU6-996P-201ENST00000365438 107 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 RNU5E-6P-201ENST00000365574 115 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 RNU2-43P-201ENST00000410306 190 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 RNU6-1068P-201ENST00000410958 103 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.92□□□□□ -1.62
SSRP1Q08945 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.92□□□□□ -1.62
SSRP1Q08945 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.92□□□□□ -1.62
SSRP1Q08945 RN7SL303P-201ENST00000469773 251 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.92□□□□□ -1.62
SSRP1Q08945 RPS29P19-201ENST00000479709 171 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 AL163973.1-201ENST00000484753 577 ntBASIC4.92□□□□□ -1.62
SSRP1Q08945 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms