Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC090772.4-201ENST00000623599 362 ntBASIC1.84□□□□□ -2.11
CCL20P78556 AC106730.3-201ENST00000624568 641 ntBASIC1.84□□□□□ -2.11
CCL20P78556 AC132825.7-201ENST00000638744 335 ntBASIC1.84□□□□□ -2.11
CCL20P78556 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCL20P78556 SDAD1P2-201ENST00000441308 2028 ntBASIC1.84□□□□□ -2.12
CCL20P78556 PABPC1P9-201ENST00000426076 1612 ntBASIC1.84□□□□□ -2.12
CCL20P78556 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CCL20P78556 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.83□□□□□ -2.12
CCL20P78556 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCL20P78556 RNA5SP374-201ENST00000362939 125 ntBASIC1.83□□□□□ -2.12
CCL20P78556 SNORD56.4-201ENST00000363883 71 ntBASIC1.83□□□□□ -2.12
CCL20P78556 RNU6-301P-201ENST00000384277 107 ntBASIC1.83□□□□□ -2.12
CCL20P78556 U3.20-201ENST00000390909 217 ntBASIC1.83□□□□□ -2.12
CCL20P78556 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCL20P78556 COTL1P1-201ENST00000422309 375 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL20P78556 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AL714022.1-201ENST00000439897 151 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL20P78556 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL20P78556 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.83□□□□□ -2.12
CCL20P78556 AC104389.3-201ENST00000445629 235 ntBASIC1.83□□□□□ -2.12
CCL20P78556 DPPA3P1-201ENST00000448050 469 ntBASIC1.83□□□□□ -2.12
CCL20P78556 RPS15AP27-201ENST00000449183 343 ntBASIC1.83□□□□□ -2.12
CCL20P78556 RNU6-420P-201ENST00000458780 107 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AC116337.2-201ENST00000477662 156 ntBASIC1.83□□□□□ -2.12
CCL20P78556 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.83□□□□□ -2.12
CCL20P78556 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL20P78556 HMGB3P3-201ENST00000510526 400 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AC068339.2-201ENST00000534395 618 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.83□□□□□ -2.12
CCL20P78556 TRAV28-201ENST00000557548 323 ntBASIC1.83□□□□□ -2.12
CCL20P78556 SULT1C2P1-202ENST00000562418 459 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AC025281.1-201ENST00000567026 265 ntBASIC1.83□□□□□ -2.12
CCL20P78556 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.83□□□□□ -2.12
CCL20P78556 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL20P78556 AC105224.1-201ENST00000587055 421 ntBASIC1.83□□□□□ -2.12
CCL20P78556 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC1.83□□□□□ -2.12
CCL20P78556 AC002487.1-201ENST00000604565 994 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AL161756.2-201ENST00000604597 246 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AP005137.2-201ENST00000609238 400 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.83□□□□□ -2.12
CCL20P78556 MIR6895-201ENST00000613497 78 ntBASIC1.83□□□□□ -2.12
CCL20P78556 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AC079395.3-201ENST00000615161 484 ntBASIC1.83□□□□□ -2.12
CCL20P78556 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.83□□□□□ -2.12
CCL20P78556 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.83□□□□□ -2.12
CCL20P78556 AC068831.8-201ENST00000620171 435 ntBASIC1.83□□□□□ -2.12
CCL20P78556 AC104820.1-201ENST00000624183 307 ntBASIC1.83□□□□□ -2.12
CCL20P78556 OR5H6-203ENST00000642105 978 ntBASIC1.83□□□□□ -2.12
CCL20P78556 MFSD8-213ENST00000641134 1327 ntBASIC1.83□□□□□ -2.12
CCL20P78556 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CCL20P78556 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
CCL20P78556 MTCO1P23-201ENST00000415223 1526 ntBASIC1.82□□□□□ -2.12
CCL20P78556 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.82□□□□□ -2.12
CCL20P78556 AL139276.1-201ENST00000311910 1001 ntBASIC1.82□□□□□ -2.12
CCL20P78556 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCL20P78556 SNORA38.1-201ENST00000364172 131 ntBASIC1.82□□□□□ -2.12
CCL20P78556 RNU6-1035P-201ENST00000384477 107 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC016769.3-201ENST00000396562 315 ntBASIC1.82□□□□□ -2.12
CCL20P78556 UBA52P6-201ENST00000399822 382 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AL139098.1-201ENST00000407291 389 ntBASIC1.82□□□□□ -2.12
CCL20P78556 MIR1290-201ENST00000408735 78 ntBASIC1.82□□□□□ -2.12
CCL20P78556 RNU2-47P-201ENST00000410649 186 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC007064.1-201ENST00000412238 351 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.82□□□□□ -2.12
CCL20P78556 HMGN2P38-201ENST00000423806 265 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AL358075.3-201ENST00000426289 226 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC091390.3-201ENST00000426478 338 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.82□□□□□ -2.12
CCL20P78556 AL121871.1-201ENST00000443413 436 ntBASIC1.82□□□□□ -2.12
CCL20P78556 RNU7-26P-201ENST00000458980 63 ntBASIC1.82□□□□□ -2.12
CCL20P78556 RNU6-717P-201ENST00000459076 104 ntBASIC1.82□□□□□ -2.12
CCL20P78556 RPL23AP45-201ENST00000476406 468 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC108729.2-201ENST00000476543 840 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC084024.2-201ENST00000503480 791 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC048346.1-201ENST00000510247 144 ntBASIC1.82□□□□□ -2.12
CCL20P78556 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.82□□□□□ -2.12
CCL20P78556 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.82□□□□□ -2.12
CCL20P78556 AC096725.1-201ENST00000514266 313 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.82□□□□□ -2.12
CCL20P78556 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCL20P78556 AC008127.2-201ENST00000549925 1075 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.82□□□□□ -2.12
CCL20P78556 RPL23AP84-201ENST00000571193 464 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC011471.1-201ENST00000585766 187 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.82□□□□□ -2.12
CCL20P78556 AL671309.1-201ENST00000603750 544 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AL121917.1-203ENST00000605534 577 ntBASIC1.82□□□□□ -2.12
CCL20P78556 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.82□□□□□ -2.12
CCL20P78556 AL359693.1-201ENST00000614959 2407 ntBASIC1.82□□□□□ -2.12
CCL20P78556 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
CCL20P78556 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCL20P78556 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.82□□□□□ -2.12
CCL20P78556 OR4G11P-202ENST00000642116 1414 ntBASIC1.82□□□□□ -2.12
CCL20P78556 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.82□□□□□ -2.12
CCL20P78556 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.82□□□□□ -2.12
CCL20P78556 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.81□□□□□ -2.12
CCL20P78556 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCL20P78556 AC097714.1-201ENST00000511272 1647 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms