Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RAE1P78406 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.84□□□□□ -1.8
RAE1P78406 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.84□□□□□ -1.8
RAE1P78406 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
RAE1P78406 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAE1P78406 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAE1P78406 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.83□□□□□ -1.8
RAE1P78406 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAE1P78406 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.83□□□□□ -1.8
RAE1P78406 HSPE1P11-201ENST00000339579 310 ntBASIC3.83□□□□□ -1.8
RAE1P78406 Y_RNA.89-201ENST00000363031 102 ntBASIC3.83□□□□□ -1.8
RAE1P78406 RNU6-534P-201ENST00000364877 106 ntBASIC3.83□□□□□ -1.8
RAE1P78406 SNORA56-201ENST00000383966 129 ntBASIC3.83□□□□□ -1.8
RAE1P78406 MIR135A2-201ENST00000384854 100 ntBASIC3.83□□□□□ -1.8
RAE1P78406 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAE1P78406 AL109755.1-201ENST00000401791 649 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC099677.1-201ENST00000420575 175 ntBASIC3.83□□□□□ -1.8
RAE1P78406 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.83□□□□□ -1.8
RAE1P78406 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 HMGB1P31-201ENST00000437242 427 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC005094.1-201ENST00000440420 368 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AL662791.1-201ENST00000441992 928 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 AC016696.1-201ENST00000446949 318 ntBASIC3.83□□□□□ -1.8
RAE1P78406 NFU1P2-201ENST00000448700 469 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.83□□□□□ -1.8
RAE1P78406 AC027673.1-201ENST00000456245 405 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 RPS3AP50-201ENST00000487064 803 ntBASIC3.83□□□□□ -1.8
RAE1P78406 RN7SL271P-201ENST00000487601 295 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC093278.1-201ENST00000494700 600 ntBASIC3.83□□□□□ -1.8
RAE1P78406 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.83□□□□□ -1.8
RAE1P78406 FCF1P3-201ENST00000496394 590 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC135721.1-201ENST00000497954 479 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 AC026801.2-201ENST00000515352 425 ntBASIC3.83□□□□□ -1.8
RAE1P78406 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.83□□□□□ -1.8
RAE1P78406 DEFB108D-201ENST00000527787 222 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC104383.1-201ENST00000530297 370 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC018630.1-201ENST00000541376 925 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC126177.3-201ENST00000551839 688 ntBASIC3.83□□□□□ -1.8
RAE1P78406 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.83□□□□□ -1.8
RAE1P78406 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAE1P78406 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAE1P78406 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAE1P78406 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 GLUD1P4-201ENST00000590914 418 ntBASIC3.83□□□□□ -1.8
RAE1P78406 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 AP000907.4-201ENST00000604143 237 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.83□□□□□ -1.8
RAE1P78406 AC008536.2-201ENST00000607284 349 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC004067.1-201ENST00000608733 700 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC093788.1-201ENST00000609356 927 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 AC002553.4-201ENST00000616896 331 ntBASIC3.83□□□□□ -1.8
RAE1P78406 AL008636.1-201ENST00000625038 1018 ntBASIC3.83□□□□□ -1.8
RAE1P78406 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.83□□□□□ -1.8
RAE1P78406 AC099654.14-201ENST00000638599 341 ntBASIC3.83□□□□□ -1.8
RAE1P78406 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.83□□□□□ -1.8
RAE1P78406 AC018555.1-201ENST00000567548 1980 ntBASIC3.83□□□□□ -1.8
RAE1P78406 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.83□□□□□ -1.8
RAE1P78406 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAE1P78406 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RAE1P78406 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAE1P78406 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
RAE1P78406 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RAE1P78406 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAE1P78406 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RAE1P78406 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.82□□□□□ -1.8
RAE1P78406 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.82□□□□□ -1.8
RAE1P78406 SNORA60-201ENST00000362396 134 ntBASIC3.82□□□□□ -1.8
RAE1P78406 RNU6-223P-201ENST00000362830 107 ntBASIC3.82□□□□□ -1.8
RAE1P78406 SNORD56.2-201ENST00000363242 71 ntBASIC3.82□□□□□ -1.8
RAE1P78406 Y_RNA.390-201ENST00000383932 102 ntBASIC3.82□□□□□ -1.8
RAE1P78406 RNU6-483P-201ENST00000384088 108 ntBASIC3.82□□□□□ -1.8
RAE1P78406 MIR124-3-201ENST00000384866 87 ntBASIC3.82□□□□□ -1.8
RAE1P78406 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAE1P78406 FGF7P8-201ENST00000402994 292 ntBASIC3.82□□□□□ -1.8
RAE1P78406 RNU4-65P-201ENST00000410473 140 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.82□□□□□ -1.8
RAE1P78406 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.82□□□□□ -1.8
RAE1P78406 RPL23AP30-201ENST00000432419 501 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.82□□□□□ -1.8
RAE1P78406 NUTF2P3-201ENST00000448540 384 ntBASIC3.82□□□□□ -1.8
RAE1P78406 RPS11P1-201ENST00000451072 473 ntBASIC3.82□□□□□ -1.8
RAE1P78406 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.82□□□□□ -1.8
RAE1P78406 RNU6-420P-201ENST00000458780 107 ntBASIC3.82□□□□□ -1.8
RAE1P78406 SNORD108-201ENST00000459332 71 ntBASIC3.82□□□□□ -1.8
RAE1P78406 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.82□□□□□ -1.8
RAE1P78406 AC083798.1-201ENST00000472671 131 ntBASIC3.82□□□□□ -1.8
RAE1P78406 RPL36AP51-201ENST00000487216 318 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AC068305.1-201ENST00000497406 726 ntBASIC3.82□□□□□ -1.8
RAE1P78406 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.82□□□□□ -1.8
RAE1P78406 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.82□□□□□ -1.8
RAE1P78406 RNU6-1281P-201ENST00000516223 105 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AC022882.1-201ENST00000532142 501 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms