Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCA4P78363 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.7□□□□□ -2.14
ABCA4P78363 AL137847.3-201ENST00000611521 109 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AL359198.2-201ENST00000611836 194 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 AC091834.1-201ENST00000614543 472 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 uc_338.9-201ENST00000617424 182 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.7□□□□□ -2.14
ABCA4P78363 AC006963.1-201ENST00000624003 1052 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
ABCA4P78363 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.7□□□□□ -2.14
ABCA4P78363 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA4P78363 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA4P78363 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA4P78363 MIR613-201ENST00000385248 95 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 RNU4-74P-201ENST00000411280 161 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 DNAJC19P4-201ENST00000440115 345 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 RPL34P26-201ENST00000445636 354 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 BUD31P2-201ENST00000449374 300 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA4P78363 SNRPFP4-201ENST00000456366 242 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA4P78363 RNU6-1308P-201ENST00000516817 103 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 MIR3199-1-201ENST00000582434 88 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
ABCA4P78363 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.69□□□□□ -2.14
ABCA4P78363 Y_RNA.783-201ENST00000613546 102 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA4P78363 U6.48-201ENST00000618523 106 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AL353748.2-201ENST00000622148 471 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA4P78363 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.69□□□□□ -2.14
ABCA4P78363 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA4P78363 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.69□□□□□ -2.14
ABCA4P78363 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
ABCA4P78363 Y_RNA.191-201ENST00000363972 113 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 SNORA14A-201ENST00000364773 135 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AL021407.1-201ENST00000404531 386 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ABCA4P78363 RNU4-65P-201ENST00000410473 140 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 RPL21P66-201ENST00000426566 466 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 Z77249.1-201ENST00000444622 1175 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 MIR449C-201ENST00000516047 92 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.69□□□□□ -2.14
ABCA4P78363 AC022690.1-201ENST00000526681 550 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.69□□□□□ -2.14
ABCA4P78363 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.69□□□□□ -2.14
ABCA4P78363 MIR4303-201ENST00000581299 66 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AC115085.1-201ENST00000588924 229 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 RPAP2P1-201ENST00000603626 1168 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 AL590282.1-201ENST00000610379 1136 ntBASIC1.69□□□□□ -2.14
ABCA4P78363 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
ABCA4P78363 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA4P78363 AL139276.1-201ENST00000311910 1001 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 RNU6-1027P-201ENST00000383998 107 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AL513331.1-201ENST00000411908 397 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 SNRPEP4-201ENST00000435815 279 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AC129850.1-201ENST00000436203 508 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 snoU13.7-201ENST00000459220 104 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AC104629.2-201ENST00000468627 598 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 RNA5SP480-201ENST00000516840 109 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ABCA4P78363 FAM60CP-201ENST00000591086 664 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AC068790.3-201ENST00000602988 553 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AL109653.1-201ENST00000603091 248 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 MTCO2P22-201ENST00000603246 681 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 YWHAQP7-201ENST00000603536 658 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.68□□□□□ -2.14
ABCA4P78363 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
ABCA4P78363 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ABCA4P78363 ZNF37BP-203ENST00000452306 1352 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AL138880.1-201ENST00000405824 642 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 MIR1250-201ENST00000408098 113 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 RNA5SP492-201ENST00000411330 114 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 RNA5SP270-201ENST00000411361 118 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AC092447.6-201ENST00000414578 210 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 RAD23BP2-201ENST00000416003 1207 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.68□□□□□ -2.14
ABCA4P78363 NDUFB4P6-201ENST00000436819 366 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AL035407.2-201ENST00000454090 378 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 RPL30P14-201ENST00000482744 348 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 MTAPP1-201ENST00000489154 819 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 snoZ278.1-201ENST00000517059 112 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.68□□□□□ -2.14
ABCA4P78363 RPL23AP78-201ENST00000599928 470 ntBASIC1.68□□□□□ -2.14
ABCA4P78363 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ABCA4P78363 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA4P78363 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
ABCA4P78363 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA4P78363 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
ABCA4P78363 RNU6-600P-201ENST00000362524 99 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 RNU6-1293P-201ENST00000384077 107 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 AL121972.1-201ENST00000402023 252 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.67□□□□□ -2.14
ABCA4P78363 RPL21P32-201ENST00000419877 477 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 AC109583.1-201ENST00000432156 268 ntBASIC1.67□□□□□ -2.14
ABCA4P78363 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ABCA4P78363 OR6C72P-201ENST00000451403 892 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms