Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.97□□□□□ -2.25
RPL39P62891 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RPL39P62891 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
RPL39P62891 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
RPL39P62891 RNU6-799P-201ENST00000363567 107 ntBASIC0.97□□□□□ -2.25
RPL39P62891 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.97□□□□□ -2.25
RPL39P62891 MTCO3P46-201ENST00000425787 232 ntBASIC0.97□□□□□ -2.25
RPL39P62891 AC093155.1-201ENST00000440164 826 ntBASIC0.97□□□□□ -2.25
RPL39P62891 AL121769.1-201ENST00000469473 401 ntBASIC0.97□□□□□ -2.25
RPL39P62891 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC0.97□□□□□ -2.25
RPL39P62891 AC118465.1-201ENST00000513820 1271 ntBASIC0.97□□□□□ -2.25
RPL39P62891 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC0.97□□□□□ -2.25
RPL39P62891 AC074050.1-201ENST00000563247 211 ntBASIC0.97□□□□□ -2.25
RPL39P62891 AC015720.1-201ENST00000565251 277 ntBASIC0.97□□□□□ -2.25
RPL39P62891 SNORD53B-201ENST00000577887 78 ntBASIC0.97□□□□□ -2.25
RPL39P62891 AL392112.1-201ENST00000605115 829 ntBASIC0.97□□□□□ -2.25
RPL39P62891 AC006338.1-201ENST00000618453 749 ntBASIC0.97□□□□□ -2.25
RPL39P62891 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC0.97□□□□□ -2.25
RPL39P62891 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
RPL39P62891 AC022336.2-201ENST00000568966 2538 ntBASIC0.96□□□□□ -2.26
RPL39P62891 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
RPL39P62891 SNORD114-1-201ENST00000362705 72 ntBASIC0.96□□□□□ -2.26
RPL39P62891 U8.1-201ENST00000362843 134 ntBASIC0.96□□□□□ -2.26
RPL39P62891 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.96□□□□□ -2.26
RPL39P62891 MIR758-201ENST00000390227 88 ntBASIC0.96□□□□□ -2.26
RPL39P62891 U8.13-201ENST00000390842 128 ntBASIC0.96□□□□□ -2.26
RPL39P62891 SNORA67.6-201ENST00000391093 99 ntBASIC0.96□□□□□ -2.26
RPL39P62891 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.96□□□□□ -2.26
RPL39P62891 AC096533.1-201ENST00000411645 353 ntBASIC0.96□□□□□ -2.26
RPL39P62891 USP9YP6-201ENST00000413550 854 ntBASIC0.96□□□□□ -2.26
RPL39P62891 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.96□□□□□ -2.26
RPL39P62891 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.96□□□□□ -2.26
RPL39P62891 AC096632.1-201ENST00000427395 310 ntBASIC0.96□□□□□ -2.26
RPL39P62891 AL035407.1-201ENST00000429211 571 ntBASIC0.96□□□□□ -2.26
RPL39P62891 MRPS33P4-201ENST00000434892 317 ntBASIC0.96□□□□□ -2.26
RPL39P62891 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC0.96□□□□□ -2.26
RPL39P62891 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC0.96□□□□□ -2.26
RPL39P62891 AC010285.1-201ENST00000470580 392 ntBASIC0.96□□□□□ -2.26
RPL39P62891 UBL5P3-201ENST00000475112 231 ntBASIC0.96□□□□□ -2.26
RPL39P62891 TRBV1-201ENST00000476502 284 ntBASIC0.96□□□□□ -2.26
RPL39P62891 MTCYBP17-201ENST00000503579 789 ntBASIC0.96□□□□□ -2.26
RPL39P62891 SNORA31.24-201ENST00000517232 57 ntBASIC0.96□□□□□ -2.26
RPL39P62891 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.96□□□□□ -2.26
RPL39P62891 ATP5F1P5-201ENST00000526403 760 ntBASIC0.96□□□□□ -2.26
RPL39P62891 MIMT1-201ENST00000597105 1050 ntBASIC0.96□□□□□ -2.26
RPL39P62891 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.96□□□□□ -2.26
RPL39P62891 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC0.96□□□□□ -2.26
RPL39P62891 AC004908.2-201ENST00000609090 574 ntBASIC0.96□□□□□ -2.26
RPL39P62891 SDR42E1P2-201ENST00000614861 481 ntBASIC0.96□□□□□ -2.26
RPL39P62891 SDR42E1P4-201ENST00000620894 481 ntBASIC0.96□□□□□ -2.26
RPL39P62891 AC010872.1-201ENST00000624225 675 ntBASIC0.96□□□□□ -2.26
RPL39P62891 AC099654.7-201ENST00000635788 2127 ntBASIC0.96□□□□□ -2.26
RPL39P62891 FAM133CP-201ENST00000332869 704 ntBASIC0.95□□□□□ -2.26
RPL39P62891 RNU4-13P-201ENST00000364019 141 ntBASIC0.95□□□□□ -2.26
RPL39P62891 SNORA16B-201ENST00000364674 135 ntBASIC0.95□□□□□ -2.26
RPL39P62891 RNU6-1072P-201ENST00000384703 107 ntBASIC0.95□□□□□ -2.26
RPL39P62891 RNU6-443P-201ENST00000384780 107 ntBASIC0.95□□□□□ -2.26
RPL39P62891 SNORD23.1-201ENST00000408212 104 ntBASIC0.95□□□□□ -2.26
RPL39P62891 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL39P62891 AL121601.2-201ENST00000438019 707 ntBASIC0.95□□□□□ -2.26
RPL39P62891 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.95□□□□□ -2.26
RPL39P62891 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.95□□□□□ -2.26
RPL39P62891 MTND4P2-201ENST00000507767 1203 ntBASIC0.95□□□□□ -2.26
RPL39P62891 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.95□□□□□ -2.26
RPL39P62891 AC091544.4-201ENST00000555268 342 ntBASIC0.95□□□□□ -2.26
RPL39P62891 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL39P62891 AC068338.1-201ENST00000565567 176 ntBASIC0.95□□□□□ -2.26
RPL39P62891 MTCYBP28-201ENST00000566728 1132 ntBASIC0.95□□□□□ -2.26
RPL39P62891 MIR4658-201ENST00000584344 65 ntBASIC0.95□□□□□ -2.26
RPL39P62891 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.95□□□□□ -2.26
RPL39P62891 RNA5SP108-201ENST00000605921 117 ntBASIC0.95□□□□□ -2.26
RPL39P62891 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.95□□□□□ -2.26
RPL39P62891 AC006023.2-201ENST00000609916 167 ntBASIC0.95□□□□□ -2.26
RPL39P62891 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.95□□□□□ -2.26
RPL39P62891 AC011330.2-201ENST00000621680 635 ntBASIC0.95□□□□□ -2.26
RPL39P62891 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPL39P62891 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
RPL39P62891 ADAM3A-203ENST00000461344 2157 ntBASIC0.94□□□□□ -2.26
RPL39P62891 RNU6-203P-201ENST00000384038 104 ntBASIC0.94□□□□□ -2.26
RPL39P62891 MIR676-201ENST00000390702 67 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AL133384.1-201ENST00000412744 351 ntBASIC0.94□□□□□ -2.26
RPL39P62891 OR51A3P-201ENST00000413596 924 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL39P62891 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.94□□□□□ -2.26
RPL39P62891 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL39P62891 BNIP3P2-201ENST00000441221 577 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AL606490.8-201ENST00000441624 319 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AC007677.1-201ENST00000445757 515 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AL357134.1-201ENST00000445848 426 ntBASIC0.94□□□□□ -2.26
RPL39P62891 CDC42P1-201ENST00000456658 548 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AC026801.1-201ENST00000497178 464 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AC093801.2-201ENST00000503966 1050 ntBASIC0.94□□□□□ -2.26
RPL39P62891 FAM92A1P2-202ENST00000504766 877 ntBASIC0.94□□□□□ -2.26
RPL39P62891 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC0.94□□□□□ -2.26
RPL39P62891 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL39P62891 BNIP3P22-201ENST00000593399 556 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AC011494.1-201ENST00000596454 237 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.94□□□□□ -2.26
RPL39P62891 AC021755.4-201ENST00000616620 456 ntBASIC0.94□□□□□ -2.26
RPL39P62891 AC109809.1-201ENST00000619665 545 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms