Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 AC083863.1-201ENST00000438811 231 ntBASIC3.62□□□□□ -1.83
CDH12P55289 USP9YP15-201ENST00000442391 422 ntBASIC3.62□□□□□ -1.83
CDH12P55289 AC010655.1-201ENST00000449336 292 ntBASIC3.62□□□□□ -1.83
CDH12P55289 FGF7P6-202ENST00000451282 293 ntBASIC3.62□□□□□ -1.83
CDH12P55289 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH12P55289 RPS7P7-201ENST00000463499 571 ntBASIC3.62□□□□□ -1.83
CDH12P55289 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 AC019235.1-201ENST00000503847 207 ntBASIC3.62□□□□□ -1.83
CDH12P55289 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH12P55289 AC021146.1-201ENST00000511202 716 ntBASIC3.62□□□□□ -1.83
CDH12P55289 ARL2BPP6-201ENST00000512757 439 ntBASIC3.62□□□□□ -1.83
CDH12P55289 RNU6-798P-201ENST00000516912 103 ntBASIC3.62□□□□□ -1.83
CDH12P55289 RNA5SP337-201ENST00000517007 109 ntBASIC3.62□□□□□ -1.83
CDH12P55289 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH12P55289 AC134698.4-201ENST00000523451 826 ntBASIC3.62□□□□□ -1.83
CDH12P55289 AC022616.3-201ENST00000523940 148 ntBASIC3.62□□□□□ -1.83
CDH12P55289 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 AL133271.1-201ENST00000538229 291 ntBASIC3.62□□□□□ -1.83
CDH12P55289 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.62□□□□□ -1.83
CDH12P55289 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH12P55289 OR4K8P-201ENST00000578842 1048 ntBASIC3.62□□□□□ -1.83
CDH12P55289 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH12P55289 AP001429.1-201ENST00000602568 530 ntBASIC3.62□□□□□ -1.83
CDH12P55289 AL391646.1-201ENST00000603860 190 ntBASIC3.62□□□□□ -1.83
CDH12P55289 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.62□□□□□ -1.83
CDH12P55289 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.62□□□□□ -1.83
CDH12P55289 MIR7641-1-201ENST00000627518 61 ntBASIC3.62□□□□□ -1.83
CDH12P55289 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH12P55289 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH12P55289 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH12P55289 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH12P55289 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH12P55289 AC244517.1-201ENST00000606030 2086 ntBASIC3.61□□□□□ -1.83
CDH12P55289 MTND5P3-201ENST00000438536 1800 ntBASIC3.61□□□□□ -1.83
CDH12P55289 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH12P55289 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH12P55289 XIAPP3-201ENST00000312918 795 ntBASIC3.61□□□□□ -1.83
CDH12P55289 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDH12P55289 Y_RNA.1-201ENST00000352915 104 ntBASIC3.61□□□□□ -1.83
CDH12P55289 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH12P55289 RNU5A-8P-201ENST00000364102 114 ntBASIC3.61□□□□□ -1.83
CDH12P55289 RNU6-1078P-201ENST00000364522 103 ntBASIC3.61□□□□□ -1.83
CDH12P55289 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDH12P55289 SNORD115-47-201ENST00000391226 86 ntBASIC3.61□□□□□ -1.83
CDH12P55289 HSPE1P8-201ENST00000406997 288 ntBASIC3.61□□□□□ -1.83
CDH12P55289 RNU6-712P-201ENST00000410558 100 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH12P55289 MTCO2P19-201ENST00000427513 598 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AC073464.1-201ENST00000429823 534 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH12P55289 AC119618.1-201ENST00000434191 222 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AL596276.1-201ENST00000434465 418 ntBASIC3.61□□□□□ -1.83
CDH12P55289 RBMX2P4-201ENST00000441256 376 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AL136380.1-201ENST00000447970 162 ntBASIC3.61□□□□□ -1.83
CDH12P55289 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH12P55289 MTND1P9-201ENST00000453775 944 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH12P55289 MTND1P12-201ENST00000455231 147 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AC007967.1-201ENST00000455422 1159 ntBASIC3.61□□□□□ -1.83
CDH12P55289 ARL4AP2-201ENST00000507378 601 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH12P55289 AP001893.2-201ENST00000526949 202 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH12P55289 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH12P55289 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH12P55289 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH12P55289 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH12P55289 AC091516.1-201ENST00000549191 703 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AL133241.1-201ENST00000556832 487 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AC090877.1-201ENST00000561418 344 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AC092325.1-201ENST00000566449 554 ntBASIC3.61□□□□□ -1.83
CDH12P55289 MIR4284-201ENST00000578924 81 ntBASIC3.61□□□□□ -1.83
CDH12P55289 COX6CP3-201ENST00000580869 223 ntBASIC3.61□□□□□ -1.83
CDH12P55289 KC877982.1-201ENST00000602313 470 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AL606834.2-201ENST00000602954 668 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AL031176.1-201ENST00000604554 466 ntBASIC3.61□□□□□ -1.83
CDH12P55289 IGHV3-29-201ENST00000604817 344 ntBASIC3.61□□□□□ -1.83
CDH12P55289 RNA5SP108-201ENST00000605921 117 ntBASIC3.61□□□□□ -1.83
CDH12P55289 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH12P55289 AC007038.2-201ENST00000608095 740 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AC245517.5-201ENST00000611529 162 ntBASIC3.61□□□□□ -1.83
CDH12P55289 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CDH12P55289 uc_338.12-201ENST00000616344 181 ntBASIC3.61□□□□□ -1.83
CDH12P55289 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH12P55289 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH12P55289 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH12P55289 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH12P55289 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH12P55289 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH12P55289 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH12P55289 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH12P55289 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms