Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CABYRP1-201ENST00000465493 1045 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF140P52738 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF140P52738 MLLT10P2-201ENST00000506434 249 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 RAC1P5-201ENST00000512182 576 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 AC026616.1-201ENST00000523157 525 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF140P52738 AC004217.3-201ENST00000551552 878 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF140P52738 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF140P52738 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.21□□□□□ -2.06
ZNF140P52738 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF140P52738 AC013562.2-201ENST00000611632 603 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 AC104307.1-201ENST00000616142 196 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 AC068722.2-201ENST00000618734 544 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 AL162233.1-201ENST00000620014 944 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF140P52738 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF140P52738 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF140P52738 MTND5P31-201ENST00000419366 1374 ntBASIC2.21□□□□□ -2.06
ZNF140P52738 AC090740.1-201ENST00000623193 2262 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF140P52738 RNA5SP139-201ENST00000364340 117 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF140P52738 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ZNF140P52738 RNU6-1074P-201ENST00000383995 104 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 SNORA80E-201ENST00000384744 137 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF140P52738 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF140P52738 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.2□□□□□ -2.06
ZNF140P52738 RPP40P1-201ENST00000426762 456 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF140P52738 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF140P52738 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 ZFAND6P1-201ENST00000434138 605 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF140P52738 AC104073.1-201ENST00000451988 151 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF140P52738 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF140P52738 TTC39CP1-201ENST00000512513 755 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.2□□□□□ -2.06
ZNF140P52738 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF140P52738 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF140P52738 AP001804.3-201ENST00000525146 880 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 ATP5F1P7-201ENST00000567330 760 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.2□□□□□ -2.06
ZNF140P52738 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF140P52738 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF140P52738 AC006329.2-201ENST00000611491 394 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 AC011890.2-201ENST00000613393 294 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.2□□□□□ -2.06
ZNF140P52738 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF140P52738 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF140P52738 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZNF140P52738 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZNF140P52738 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF140P52738 RNU6-730P-201ENST00000383954 104 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 MIR649-201ENST00000384843 97 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
ZNF140P52738 TATDN1P1-201ENST00000414123 891 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AL513477.1-202ENST00000417061 214 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AL137014.1-201ENST00000420490 1226 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 PTP4A1P7-201ENST00000423476 514 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AL035410.1-201ENST00000427409 427 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 MTND4LP7-201ENST00000431728 294 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.19□□□□□ -2.06
ZNF140P52738 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF140P52738 LSM1P1-201ENST00000438629 273 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AL691517.1-201ENST00000440833 1235 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 RPS26P30-201ENST00000443431 335 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 HMGN1P5-201ENST00000448591 263 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AC103833.1-201ENST00000517442 172 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.19□□□□□ -2.06
ZNF140P52738 OR10V3P-201ENST00000525712 725 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AC018630.1-201ENST00000541376 925 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF140P52738 AC074051.3-201ENST00000570238 358 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ZNF140P52738 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF140P52738 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF140P52738 VN1R88P-201ENST00000596787 292 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 U73023.1-201ENST00000603134 700 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AC106900.2-201ENST00000604994 317 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AC106028.5-201ENST00000610332 395 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AL138880.2-201ENST00000616214 239 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.19□□□□□ -2.06
ZNF140P52738 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.19□□□□□ -2.06
ZNF140P52738 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.19□□□□□ -2.06
ZNF140P52738 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.19□□□□□ -2.06
ZNF140P52738 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
ZNF140P52738 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
ZNF140P52738 AC026241.1-201ENST00000517873 2142 ntBASIC2.18□□□□□ -2.06
ZNF140P52738 AC099654.7-201ENST00000635788 2127 ntBASIC2.18□□□□□ -2.06
ZNF140P52738 NACA3P-201ENST00000359690 648 ntBASIC2.18□□□□□ -2.06
ZNF140P52738 RNA5SP393-201ENST00000363423 117 ntBASIC2.18□□□□□ -2.06
ZNF140P52738 RNU1-73P-201ENST00000383971 164 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms