Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC008127.2-201ENST00000549925 1075 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.87□□□□□ -1.63
MRE11P49959 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.87□□□□□ -1.63
MRE11P49959 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.87□□□□□ -1.63
MRE11P49959 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.87□□□□□ -1.63
MRE11P49959 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.87□□□□□ -1.63
MRE11P49959 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.87□□□□□ -1.63
MRE11P49959 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.87□□□□□ -1.63
MRE11P49959 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.87□□□□□ -1.63
MRE11P49959 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.87□□□□□ -1.63
MRE11P49959 AC090948.1-201ENST00000607464 549 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AC096577.2-201ENST00000611455 153 ntBASIC4.87□□□□□ -1.63
MRE11P49959 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.87□□□□□ -1.63
MRE11P49959 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AC244205.2-202ENST00000635781 342 ntBASIC4.87□□□□□ -1.63
MRE11P49959 RAD17P1-201ENST00000418130 2042 ntBASIC4.87□□□□□ -1.63
MRE11P49959 AC107081.3-201ENST00000612715 2034 ntBASIC4.87□□□□□ -1.63
MRE11P49959 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.87□□□□□ -1.63
MRE11P49959 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MRE11P49959 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
MRE11P49959 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MRE11P49959 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
MRE11P49959 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MRE11P49959 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.86□□□□□ -1.63
MRE11P49959 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 Y_RNA.46-201ENST00000362695 102 ntBASIC4.86□□□□□ -1.63
MRE11P49959 RNU1-18P-201ENST00000363062 164 ntBASIC4.86□□□□□ -1.63
MRE11P49959 SNORD56.2-201ENST00000363242 71 ntBASIC4.86□□□□□ -1.63
MRE11P49959 RNU6-282P-201ENST00000365357 103 ntBASIC4.86□□□□□ -1.63
MRE11P49959 RNA5SP283-201ENST00000365604 119 ntBASIC4.86□□□□□ -1.63
MRE11P49959 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MRE11P49959 RNU6-1279P-201ENST00000383917 103 ntBASIC4.86□□□□□ -1.63
MRE11P49959 RNU6-116P-201ENST00000384042 109 ntBASIC4.86□□□□□ -1.63
MRE11P49959 HMGN2P8-201ENST00000391458 268 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AC011933.1-201ENST00000413334 321 ntBASIC4.86□□□□□ -1.63
MRE11P49959 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.86□□□□□ -1.63
MRE11P49959 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.86□□□□□ -1.63
MRE11P49959 AL353193.1-201ENST00000421444 268 ntBASIC4.86□□□□□ -1.63
MRE11P49959 RPL30P3-201ENST00000424262 333 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.86□□□□□ -1.63
MRE11P49959 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.86□□□□□ -1.63
MRE11P49959 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.86□□□□□ -1.63
MRE11P49959 RPL23AP20-201ENST00000447965 421 ntBASIC4.86□□□□□ -1.63
MRE11P49959 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 AC022364.2-201ENST00000457963 554 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AC116533.1-201ENST00000459748 321 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AC026427.2-201ENST00000506228 536 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AC005798.1-201ENST00000513715 387 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 RNU6-445P-201ENST00000516949 107 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.86□□□□□ -1.63
MRE11P49959 HSPA8P13-201ENST00000523715 472 ntBASIC4.86□□□□□ -1.63
MRE11P49959 CENPUP1-201ENST00000526649 1202 ntBASIC4.86□□□□□ -1.63
MRE11P49959 OR8L1P-201ENST00000534005 955 ntBASIC4.86□□□□□ -1.63
MRE11P49959 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.86□□□□□ -1.63
MRE11P49959 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.86□□□□□ -1.63
MRE11P49959 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.86□□□□□ -1.63
MRE11P49959 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.86□□□□□ -1.63
MRE11P49959 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 NRBF2P5-201ENST00000603087 788 ntBASIC4.86□□□□□ -1.63
MRE11P49959 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.86□□□□□ -1.63
MRE11P49959 HSPE1P14-201ENST00000605812 302 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AL161734.1-201ENST00000609720 557 ntBASIC4.86□□□□□ -1.63
MRE11P49959 MIR6891-201ENST00000618788 93 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AL136964.1-201ENST00000622038 2990 ntBASIC4.86□□□□□ -1.63
MRE11P49959 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MRE11P49959 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.86□□□□□ -1.63
MRE11P49959 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.86□□□□□ -1.63
MRE11P49959 AC108467.2-201ENST00000617640 1597 ntBASIC4.86□□□□□ -1.63
MRE11P49959 AC090229.1-201ENST00000590983 1609 ntBASIC4.86□□□□□ -1.63
MRE11P49959 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
MRE11P49959 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
MRE11P49959 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MRE11P49959 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MRE11P49959 Y_RNA.481-201ENST00000384373 102 ntBASIC4.85□□□□□ -1.63
MRE11P49959 EIF5P1-201ENST00000400019 1231 ntBASIC4.85□□□□□ -1.63
MRE11P49959 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.85□□□□□ -1.63
MRE11P49959 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.85□□□□□ -1.63
MRE11P49959 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.85□□□□□ -1.63
MRE11P49959 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.85□□□□□ -1.63
MRE11P49959 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.85□□□□□ -1.63
MRE11P49959 SDCBPP1-201ENST00000440192 890 ntBASIC4.85□□□□□ -1.63
MRE11P49959 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.85□□□□□ -1.63
MRE11P49959 AC093019.1-201ENST00000443135 252 ntBASIC4.85□□□□□ -1.63
MRE11P49959 AL118496.2-201ENST00000448300 230 ntBASIC4.85□□□□□ -1.63
MRE11P49959 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.85□□□□□ -1.63
MRE11P49959 RPS27AP17-201ENST00000463344 455 ntBASIC4.85□□□□□ -1.63
MRE11P49959 PPIAP15-201ENST00000479662 484 ntBASIC4.85□□□□□ -1.63
MRE11P49959 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.85□□□□□ -1.63
MRE11P49959 MTCO2P30-201ENST00000503662 364 ntBASIC4.85□□□□□ -1.63
MRE11P49959 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MRE11P49959 AC024224.1-201ENST00000538284 609 ntBASIC4.85□□□□□ -1.63
MRE11P49959 MIR4286-201ENST00000580651 93 ntBASIC4.85□□□□□ -1.63
MRE11P49959 MIR98-201ENST00000606724 119 ntBASIC4.85□□□□□ -1.63
MRE11P49959 AC093788.1-201ENST00000609356 927 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms