Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPS26P15-201ENST00000488067 348 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 SNORA40.12-201ENST00000516329 111 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 AP000827.1-201ENST00000527814 258 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AC063950.1-201ENST00000552036 308 ntBASIC3.69□□□□□ -1.82
SOX2P48431 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX2P48431 AC060780.3-201ENST00000589464 80 ntBASIC3.69□□□□□ -1.82
SOX2P48431 BNIP3P30-201ENST00000601184 574 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AC025946.2-201ENST00000603398 234 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AL049634.3-201ENST00000604968 457 ntBASIC3.69□□□□□ -1.82
SOX2P48431 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.69□□□□□ -1.82
SOX2P48431 MIR6130-201ENST00000619419 109 ntBASIC3.69□□□□□ -1.82
SOX2P48431 YWHAEP7-203ENST00000622054 312 ntBASIC3.69□□□□□ -1.82
SOX2P48431 AC009033.1-201ENST00000624279 431 ntBASIC3.69□□□□□ -1.82
SOX2P48431 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX2P48431 CKAP2P1-201ENST00000555477 2049 ntBASIC3.69□□□□□ -1.82
SOX2P48431 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SOX2P48431 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX2P48431 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.69□□□□□ -1.82
SOX2P48431 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SOX2P48431 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SOX2P48431 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX2P48431 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.68□□□□□ -1.82
SOX2P48431 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SOX2P48431 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SOX2P48431 DDX10P1-201ENST00000448545 1933 ntBASIC3.68□□□□□ -1.82
SOX2P48431 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SOX2P48431 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SOX2P48431 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SOX2P48431 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SOX2P48431 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SOX2P48431 SNORA69-201ENST00000383895 132 ntBASIC3.68□□□□□ -1.82
SOX2P48431 SNORA37-201ENST00000384504 129 ntBASIC3.68□□□□□ -1.82
SOX2P48431 MIR135A2-201ENST00000384854 100 ntBASIC3.68□□□□□ -1.82
SOX2P48431 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SOX2P48431 SNORA3C-201ENST00000408792 125 ntBASIC3.68□□□□□ -1.82
SOX2P48431 RAC1P3-201ENST00000416129 580 ntBASIC3.68□□□□□ -1.82
SOX2P48431 UBE2FP1-201ENST00000416536 447 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.68□□□□□ -1.82
SOX2P48431 GTF2IP20-201ENST00000431663 360 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.68□□□□□ -1.82
SOX2P48431 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.68□□□□□ -1.82
SOX2P48431 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.68□□□□□ -1.82
SOX2P48431 AC005094.1-201ENST00000440420 368 ntBASIC3.68□□□□□ -1.82
SOX2P48431 ARL2BPP10-201ENST00000446487 531 ntBASIC3.68□□□□□ -1.82
SOX2P48431 MTND5P20-201ENST00000448677 143 ntBASIC3.68□□□□□ -1.82
SOX2P48431 SNRPGP5-201ENST00000456003 220 ntBASIC3.68□□□□□ -1.82
SOX2P48431 RNU7-63P-201ENST00000459054 62 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC007537.2-201ENST00000472093 511 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.68□□□□□ -1.82
SOX2P48431 RPS29P25-201ENST00000481709 171 ntBASIC3.68□□□□□ -1.82
SOX2P48431 RPS15AP36-201ENST00000492022 382 ntBASIC3.68□□□□□ -1.82
SOX2P48431 HSPD1P15-201ENST00000505573 1122 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC008638.1-201ENST00000506035 866 ntBASIC3.68□□□□□ -1.82
SOX2P48431 IGLVIV-65-201ENST00000517313 360 ntBASIC3.68□□□□□ -1.82
SOX2P48431 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.68□□□□□ -1.82
SOX2P48431 FAM60DP-201ENST00000524174 632 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.68□□□□□ -1.82
SOX2P48431 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.68□□□□□ -1.82
SOX2P48431 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.68□□□□□ -1.82
SOX2P48431 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.68□□□□□ -1.82
SOX2P48431 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.68□□□□□ -1.82
SOX2P48431 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.68□□□□□ -1.82
SOX2P48431 MIR4436B2-201ENST00000581415 91 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC012417.1-201ENST00000582307 1039 ntBASIC3.68□□□□□ -1.82
SOX2P48431 MIR4436B1-201ENST00000583272 91 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC005255.1-201ENST00000593748 216 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC025253.1-201ENST00000613623 543 ntBASIC3.68□□□□□ -1.82
SOX2P48431 uc_338.32-201ENST00000615087 172 ntBASIC3.68□□□□□ -1.82
SOX2P48431 MIR7155-201ENST00000615925 56 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SOX2P48431 FRG1KP-201ENST00000623592 341 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC008013.2-202ENST00000637965 364 ntBASIC3.68□□□□□ -1.82
SOX2P48431 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SOX2P48431 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SOX2P48431 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.68□□□□□ -1.82
SOX2P48431 MAPK10-253ENST00000641010 4072 ntBASIC3.68□□□□□ -1.82
SOX2P48431 AC090337.1-201ENST00000579651 2074 ntBASIC3.67□□□□□ -1.82
SOX2P48431 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.67□□□□□ -1.82
SOX2P48431 RAD17P1-201ENST00000418130 2042 ntBASIC3.67□□□□□ -1.82
SOX2P48431 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.67□□□□□ -1.82
SOX2P48431 RNY3P3-201ENST00000363816 102 ntBASIC3.67□□□□□ -1.82
SOX2P48431 Y_RNA.367-201ENST00000365544 101 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SOX2P48431 SNORA70F-201ENST00000384142 135 ntBASIC3.67□□□□□ -1.82
SOX2P48431 RNU6-606P-201ENST00000384721 111 ntBASIC3.67□□□□□ -1.82
SOX2P48431 MT-TL1-201ENST00000386347 75 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AL136372.1-201ENST00000403060 228 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX2P48431 RPS7P15-201ENST00000415804 584 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC099677.1-201ENST00000420575 175 ntBASIC3.67□□□□□ -1.82
SOX2P48431 OR2AS1P-201ENST00000427827 319 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.67□□□□□ -1.82
SOX2P48431 AL138799.3-201ENST00000438968 350 ntBASIC3.67□□□□□ -1.82
SOX2P48431 RPL23AP52-201ENST00000439311 478 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AC016691.1-201ENST00000441321 413 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX2P48431 SNRPGP6-201ENST00000451124 220 ntBASIC3.67□□□□□ -1.82
SOX2P48431 AL356010.1-201ENST00000456364 102 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms