Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX2-1P43699 AC116533.1-201ENST00000459748 321 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 RN7SL303P-201ENST00000469773 251 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 RN7SL860P-201ENST00000473738 223 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 ACTR3P3-201ENST00000480448 893 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 RN7SL604P-201ENST00000492589 296 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
NKX2-1P43699 AC093840.1-201ENST00000511599 336 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-1P43699 AP003122.4-201ENST00000530980 758 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-1P43699 ZNF519P3-201ENST00000557158 1032 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-1P43699 AP005205.1-201ENST00000563503 508 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-1P43699 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.16□□□□□ -1.9
NKX2-1P43699 NRBF2P1-201ENST00000587407 859 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC006116.10-201ENST00000591836 581 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC068790.3-201ENST00000602988 553 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC015871.2-201ENST00000603605 948 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC103710.1-201ENST00000610003 901 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 BX664608.1-201ENST00000610519 487 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AL589743.7-201ENST00000612637 233 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 MIR7151-201ENST00000617477 60 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AL603758.1-201ENST00000618654 241 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC012150.2-201ENST00000621300 544 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 AC095031.1-201ENST00000623685 672 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.16□□□□□ -1.9
NKX2-1P43699 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-1P43699 OR5BE1P-202ENST00000641168 1176 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NKX2-1P43699 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-1P43699 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-1P43699 AC092326.2-201ENST00000624772 1561 ntBASIC3.16□□□□□ -1.9
NKX2-1P43699 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-1P43699 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NKX2-1P43699 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NKX2-1P43699 AC138915.3-201ENST00000562908 1389 ntBASIC3.15□□□□□ -1.9
NKX2-1P43699 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NKX2-1P43699 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
NKX2-1P43699 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NKX2-1P43699 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-1P43699 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NKX2-1P43699 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-1P43699 RNA5SP399-201ENST00000364003 117 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 RNA5SP509-201ENST00000364577 119 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
NKX2-1P43699 RNU6-328P-201ENST00000390887 106 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 Y_RNA.582-201ENST00000391023 95 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 RNU2-66P-201ENST00000410650 161 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-1P43699 HSPE1P12-201ENST00000412576 301 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AC002075.2-201ENST00000425207 252 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 MTND3P21-201ENST00000433774 331 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.15□□□□□ -1.91
NKX2-1P43699 CBX1P1-201ENST00000440184 427 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-1P43699 RPL26P6-201ENST00000440913 438 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 TPT1P7-201ENST00000458300 517 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AC078785.3-201ENST00000476607 425 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AC108860.1-201ENST00000484521 383 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-1P43699 UBE2CP3-201ENST00000502715 450 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 KCTD9P5-201ENST00000504141 1170 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.15□□□□□ -1.91
NKX2-1P43699 RPL37P25-201ENST00000507308 276 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AC091133.4-201ENST00000511142 308 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.15□□□□□ -1.91
NKX2-1P43699 MTND4LP31-201ENST00000514859 294 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 MTCO2P4-201ENST00000517968 247 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AP003072.2-201ENST00000527756 676 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC091516.1-201ENST00000549191 703 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.15□□□□□ -1.91
NKX2-1P43699 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AC105224.1-201ENST00000587055 421 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-1P43699 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-1P43699 OR10AB1P-201ENST00000609613 938 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AL391261.4-201ENST00000616012 481 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC019226.1-201ENST00000625666 515 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 PISRT1-201ENST00000626175 531 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 AC084035.1-201ENST00000634543 607 ntBASIC3.15□□□□□ -1.91
NKX2-1P43699 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.15□□□□□ -1.91
NKX2-1P43699 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.15□□□□□ -1.91
NKX2-1P43699 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-1P43699 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NKX2-1P43699 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-1P43699 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-1P43699 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-1P43699 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-1P43699 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NKX2-1P43699 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms