Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC068657.1-201ENST00000520807 306 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM23P36406 AC022861.1-201ENST00000522981 663 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 AC024224.1-201ENST00000538284 609 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM23P36406 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM23P36406 AL157394.1-201ENST00000562983 1224 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.17□□□□□ -1.9
TRIM23P36406 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.17□□□□□ -1.9
TRIM23P36406 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM23P36406 VN1R78P-201ENST00000597393 564 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 VN1R82P-201ENST00000601481 356 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 AC005000.2-201ENST00000605468 310 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 AC131235.4-201ENST00000609288 620 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 AC245297.2-201ENST00000610119 565 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 AL110115.1-201ENST00000614396 364 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 AC116618.1-201ENST00000634617 774 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM23P36406 OR5BR1P-201ENST00000524992 1330 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
TRIM23P36406 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
TRIM23P36406 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRIM23P36406 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM23P36406 OR5H2-201ENST00000355273 945 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TRIM23P36406 TPMTP2-201ENST00000414372 726 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 MTATP6P27-201ENST00000416987 621 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 RPL7P30-201ENST00000420888 709 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM23P36406 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.16□□□□□ -1.9
TRIM23P36406 YWHAZP7-201ENST00000436906 631 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 MTCO2P20-201ENST00000437339 673 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 MUPP-201ENST00000438111 566 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM23P36406 RPL21P2-201ENST00000440049 481 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 RPL36AP33-201ENST00000450395 310 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AL590639.1-201ENST00000456484 337 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM23P36406 AC093278.1-201ENST00000494700 600 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM23P36406 MTCYBP17-201ENST00000503579 789 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AC104090.1-201ENST00000506341 1171 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 RNU6-56P-201ENST00000516986 93 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM23P36406 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.16□□□□□ -1.9
TRIM23P36406 MTND1P24-201ENST00000552175 861 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM23P36406 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM23P36406 AGGF1P5-201ENST00000567900 919 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM23P36406 MIR4325-201ENST00000583049 90 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM23P36406 AC080013.3-201ENST00000606839 578 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AC106028.5-201ENST00000610332 395 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AL596245.1-201ENST00000618994 362 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AL356585.4-201ENST00000623078 1229 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 AC231657.1-201ENST00000624313 397 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
TRIM23P36406 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM23P36406 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM23P36406 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM23P36406 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM23P36406 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TRIM23P36406 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM23P36406 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM23P36406 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.15□□□□□ -1.9
TRIM23P36406 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM23P36406 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM23P36406 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM23P36406 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM23P36406 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM23P36406 RNU1-75P-201ENST00000347264 129 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM23P36406 SNORA48.2-201ENST00000390926 124 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 RPS24P7-201ENST00000416921 246 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 MTCYBP38-201ENST00000417160 1123 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM23P36406 RPL21P32-201ENST00000419877 477 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 AC093151.1-201ENST00000427711 313 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 AL590233.1-201ENST00000430017 456 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM23P36406 MTCYBP34-201ENST00000439552 670 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 HMGB3P11-201ENST00000440127 604 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM23P36406 AL121871.1-201ENST00000443413 436 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 Z82190.1-201ENST00000454534 490 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM23P36406 USP9YP25-201ENST00000457708 443 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM23P36406 S100A11P2-201ENST00000467589 312 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 RPS29P2-201ENST00000479278 136 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 AC006445.1-201ENST00000491925 405 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 COX7A2P2-201ENST00000505291 250 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 AC034244.1-201ENST00000507687 207 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 RNA5SP216-201ENST00000516111 123 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 RN7SKP265-201ENST00000516448 223 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.15□□□□□ -1.91
TRIM23P36406 AP001804.3-201ENST00000525146 880 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms