Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 COL6A4P2-205ENST00000509855 506 ntBASIC1.57□□□□□ -2.16
CKS2P33552 SNORA67.7-201ENST00000516664 135 ntBASIC1.57□□□□□ -2.16
CKS2P33552 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.57□□□□□ -2.16
CKS2P33552 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.57□□□□□ -2.16
CKS2P33552 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.57□□□□□ -2.16
CKS2P33552 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CKS2P33552 OR11H5P-201ENST00000554039 926 ntBASIC1.57□□□□□ -2.16
CKS2P33552 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.57□□□□□ -2.16
CKS2P33552 MIR3935-201ENST00000583472 104 ntBASIC1.57□□□□□ -2.16
CKS2P33552 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.57□□□□□ -2.16
CKS2P33552 SUMO2P14-201ENST00000604488 293 ntBASIC1.57□□□□□ -2.16
CKS2P33552 APOOP1-201ENST00000604695 592 ntBASIC1.57□□□□□ -2.16
CKS2P33552 ATP1B3P1-201ENST00000605365 821 ntBASIC1.57□□□□□ -2.16
CKS2P33552 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.57□□□□□ -2.16
CKS2P33552 AC046143.2-201ENST00000609789 160 ntBASIC1.57□□□□□ -2.16
CKS2P33552 AC005332.10-201ENST00000612725 619 ntBASIC1.57□□□□□ -2.16
CKS2P33552 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.57□□□□□ -2.16
CKS2P33552 AC009159.1-201ENST00000618386 642 ntBASIC1.57□□□□□ -2.16
CKS2P33552 DUXAP9-208ENST00000622815 614 ntBASIC1.57□□□□□ -2.16
CKS2P33552 AC068620.4-201ENST00000636730 1182 ntBASIC1.57□□□□□ -2.16
CKS2P33552 OR8B1P-202ENST00000641132 1178 ntBASIC1.57□□□□□ -2.16
CKS2P33552 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.57□□□□□ -2.16
CKS2P33552 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CKS2P33552 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CKS2P33552 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
CKS2P33552 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CKS2P33552 ZNF658B-202ENST00000615961 3375 ntBASIC1.56□□□□□ -2.16
CKS2P33552 ANKRD36P1-201ENST00000344424 659 ntBASIC1.56□□□□□ -2.16
CKS2P33552 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.56□□□□□ -2.16
CKS2P33552 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS2P33552 RNU6-891P-201ENST00000384280 111 ntBASIC1.56□□□□□ -2.16
CKS2P33552 MIR196B-201ENST00000384852 84 ntBASIC1.56□□□□□ -2.16
CKS2P33552 MIR767-201ENST00000390228 109 ntBASIC1.56□□□□□ -2.16
CKS2P33552 RNU6-1197P-201ENST00000391183 107 ntBASIC1.56□□□□□ -2.16
CKS2P33552 SNORD23.1-201ENST00000408212 104 ntBASIC1.56□□□□□ -2.16
CKS2P33552 HMGB3P31-201ENST00000413333 595 ntBASIC1.56□□□□□ -2.16
CKS2P33552 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.56□□□□□ -2.16
CKS2P33552 NANOGP5-201ENST00000424456 877 ntBASIC1.56□□□□□ -2.16
CKS2P33552 RPL7P44-201ENST00000424827 742 ntBASIC1.56□□□□□ -2.16
CKS2P33552 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS2P33552 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS2P33552 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS2P33552 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS2P33552 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.56□□□□□ -2.16
CKS2P33552 RPS15AP27-201ENST00000449183 343 ntBASIC1.56□□□□□ -2.16
CKS2P33552 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.56□□□□□ -2.16
CKS2P33552 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.56□□□□□ -2.16
CKS2P33552 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS2P33552 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.56□□□□□ -2.16
CKS2P33552 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS2P33552 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS2P33552 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.56□□□□□ -2.16
CKS2P33552 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.56□□□□□ -2.16
CKS2P33552 AC008676.3-201ENST00000521237 435 ntBASIC1.56□□□□□ -2.16
CKS2P33552 AC022616.2-201ENST00000523185 300 ntBASIC1.56□□□□□ -2.16
CKS2P33552 UBTFL10-201ENST00000528532 562 ntBASIC1.56□□□□□ -2.16
CKS2P33552 HMGB1P14-201ENST00000557424 591 ntBASIC1.56□□□□□ -2.16
CKS2P33552 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.56□□□□□ -2.16
CKS2P33552 MIMT1-201ENST00000597105 1050 ntBASIC1.56□□□□□ -2.16
CKS2P33552 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.56□□□□□ -2.16
CKS2P33552 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.56□□□□□ -2.16
CKS2P33552 AL109659.3-201ENST00000624985 950 ntBASIC1.56□□□□□ -2.16
CKS2P33552 AC093591.3-201ENST00000634516 308 ntBASIC1.56□□□□□ -2.16
CKS2P33552 MIR203B-201ENST00000636080 86 ntBASIC1.56□□□□□ -2.16
CKS2P33552 ZNF833P-201ENST00000424938 1494 ntBASIC1.56□□□□□ -2.16
CKS2P33552 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.55□□□□□ -2.16
CKS2P33552 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CKS2P33552 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CKS2P33552 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
CKS2P33552 SNORA46.1-201ENST00000391069 153 ntBASIC1.55□□□□□ -2.16
CKS2P33552 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.55□□□□□ -2.16
CKS2P33552 RPS3AP24-201ENST00000407896 734 ntBASIC1.55□□□□□ -2.16
CKS2P33552 Y_RNA.625-201ENST00000411256 107 ntBASIC1.55□□□□□ -2.16
CKS2P33552 RPL17P12-201ENST00000413391 526 ntBASIC1.55□□□□□ -2.16
CKS2P33552 NPM1P11-201ENST00000417106 855 ntBASIC1.55□□□□□ -2.16
CKS2P33552 KRR1P1-201ENST00000419430 803 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.55□□□□□ -2.16
CKS2P33552 HMGN2P38-201ENST00000423806 265 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AC019097.1-201ENST00000424783 735 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AC063976.3-201ENST00000426849 329 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 UBE2V1P5-201ENST00000440070 405 ntBASIC1.55□□□□□ -2.16
CKS2P33552 ANKRD26P4-201ENST00000455755 950 ntBASIC1.55□□□□□ -2.16
CKS2P33552 RN7SL274P-201ENST00000492268 272 ntBASIC1.55□□□□□ -2.16
CKS2P33552 KLRA1P-201ENST00000503499 986 ntBASIC1.55□□□□□ -2.16
CKS2P33552 RNA5SP200-201ENST00000516360 103 ntBASIC1.55□□□□□ -2.16
CKS2P33552 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 HAUS1P3-201ENST00000523909 662 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AC118942.1-201ENST00000529674 1035 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 AC074029.2-201ENST00000551045 634 ntBASIC1.55□□□□□ -2.16
CKS2P33552 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 MTCO1P40-201ENST00000574371 625 ntBASIC1.55□□□□□ -2.16
CKS2P33552 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.55□□□□□ -2.16
CKS2P33552 MIR3616-201ENST00000584070 92 ntBASIC1.55□□□□□ -2.16
CKS2P33552 MIR5002-201ENST00000584713 97 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AC012254.4-201ENST00000588843 273 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms