Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RN7SL274P-201ENST00000492268 272 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 AC023050.1-201ENST00000498198 304 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 AC009901.1-201ENST00000506703 541 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 RPPH1-2P-201ENST00000516688 293 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 IGLV3-17-201ENST00000519099 244 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 OR4R1P-201ENST00000529879 463 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGA1P17096 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGA1P17096 MTND2P13-201ENST00000577438 1039 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 MIR4498-201ENST00000577599 66 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 AC124283.4-201ENST00000581815 456 ntBASIC1.71□□□□□ -2.14
HMGA1P17096 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMGA1P17096 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
HMGA1P17096 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 ZNF876P-202ENST00000398732 1485 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 PABPC1P9-201ENST00000426076 1612 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMGA1P17096 UBE2L2-201ENST00000254302 429 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 MIR378A-201ENST00000362177 66 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 Y_RNA.338-201ENST00000365320 114 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 RNU2-25P-201ENST00000411041 191 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGA1P17096 AL451074.3-201ENST00000437709 472 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGA1P17096 LSM1P1-201ENST00000438629 273 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGA1P17096 RPS29P12-201ENST00000460178 152 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGA1P17096 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGA1P17096 AC079203.1-201ENST00000487972 404 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 HMGB3P3-201ENST00000510526 400 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 AC010625.1-201ENST00000511296 403 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGA1P17096 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGA1P17096 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGA1P17096 AC121758.2-201ENST00000553271 193 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGA1P17096 AC093536.2-201ENST00000565257 1406 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 AP004372.1-201ENST00000604842 844 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 AC016727.1-205ENST00000605437 569 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGA1P17096 AC138915.1-201ENST00000565427 1685 ntBASIC1.7□□□□□ -2.14
HMGA1P17096 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGA1P17096 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
HMGA1P17096 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
HMGA1P17096 AL139276.1-201ENST00000311910 1001 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 SNORA7.2-201ENST00000364446 145 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 RNU6-225P-201ENST00000384613 103 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 TAS2R15P-201ENST00000390674 928 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 AC013268.2-201ENST00000420753 337 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 SRIP2-201ENST00000428470 166 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGA1P17096 AC135721.1-201ENST00000497954 479 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 AC010627.1-201ENST00000503819 1294 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGA1P17096 AC093281.2-201ENST00000510153 597 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.69□□□□□ -2.14
HMGA1P17096 AC087808.1-201ENST00000520501 361 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGA1P17096 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 MIR6895-201ENST00000613497 78 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 AC098657.3-201ENST00000620434 263 ntBASIC1.69□□□□□ -2.14
HMGA1P17096 MAPK10-266ENST00000641066 6555 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 RNU4-52P-201ENST00000384209 138 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 RNU2-71P-201ENST00000411395 189 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMGA1P17096 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGA1P17096 AC241520.1-201ENST00000422654 1099 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 HMGN2P38-201ENST00000423806 265 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGA1P17096 AL353898.1-201ENST00000444055 238 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMGA1P17096 OR5H4P-201ENST00000510851 923 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.68□□□□□ -2.14
HMGA1P17096 AC006499.2-201ENST00000513470 337 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGA1P17096 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGA1P17096 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGA1P17096 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGA1P17096 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGA1P17096 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGA1P17096 SNORD84-203ENST00000584275 78 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AC023043.2-201ENST00000589678 1026 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AL645939.4-201ENST00000604495 135 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AL161734.1-201ENST00000609720 557 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AC010872.1-201ENST00000624225 675 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 OR1S1-201ENST00000624470 978 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGA1P17096 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.68□□□□□ -2.14
HMGA1P17096 SNORA67.1-201ENST00000364749 141 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 RNU6-1180P-201ENST00000364935 107 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 RNU6-1027P-201ENST00000383998 107 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 MIR153-1-201ENST00000384914 90 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 RNU2-17P-201ENST00000410290 190 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 RN7SKP101-201ENST00000411376 320 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 RPS7P9-201ENST00000414704 586 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 TRGV6-201ENST00000417928 299 ntBASIC1.67□□□□□ -2.14
HMGA1P17096 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms