Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
TPM1P09493 NRBF2P5-201ENST00000603087 788 ntBASIC2.73□□□□□ -1.97
TPM1P09493 AL645944.1-201ENST00000603857 493 ntBASIC2.73□□□□□ -1.97
TPM1P09493 MIR6895-201ENST00000613497 78 ntBASIC2.73□□□□□ -1.97
TPM1P09493 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM1P09493 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM1P09493 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM1P09493 AL139276.1-201ENST00000311910 1001 ntBASIC2.72□□□□□ -1.97
TPM1P09493 RNA5SP456-201ENST00000364002 114 ntBASIC2.72□□□□□ -1.97
TPM1P09493 SNORD114-30-201ENST00000364448 72 ntBASIC2.72□□□□□ -1.97
TPM1P09493 RNU6-883P-201ENST00000384597 107 ntBASIC2.72□□□□□ -1.97
TPM1P09493 MIR767-201ENST00000390228 109 ntBASIC2.72□□□□□ -1.97
TPM1P09493 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.72□□□□□ -1.97
TPM1P09493 OR4K11P-201ENST00000431829 904 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AL135938.1-201ENST00000443141 297 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AL592447.1-201ENST00000447592 540 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AL358232.1-201ENST00000448030 501 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AC104978.1-201ENST00000449387 391 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.72□□□□□ -1.97
TPM1P09493 AC108729.2-201ENST00000476543 840 ntBASIC2.72□□□□□ -1.97
TPM1P09493 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM1P09493 AC084024.2-201ENST00000503480 791 ntBASIC2.72□□□□□ -1.97
TPM1P09493 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM1P09493 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.72□□□□□ -1.97
TPM1P09493 RNA5SP471-201ENST00000516971 106 ntBASIC2.72□□□□□ -1.97
TPM1P09493 IGLV3-17-201ENST00000519099 244 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM1P09493 AC068339.2-201ENST00000534395 618 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM1P09493 GLYCAM1-201ENST00000546596 285 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.72□□□□□ -1.97
TPM1P09493 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM1P09493 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.72□□□□□ -1.97
TPM1P09493 AC105224.1-201ENST00000587055 421 ntBASIC2.72□□□□□ -1.97
TPM1P09493 U4.3-201ENST00000621047 82 ntBASIC2.72□□□□□ -1.97
TPM1P09493 AC106730.3-201ENST00000624568 641 ntBASIC2.72□□□□□ -1.97
TPM1P09493 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM1P09493 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM1P09493 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
TPM1P09493 MTCO1P23-201ENST00000415223 1526 ntBASIC2.72□□□□□ -1.97
TPM1P09493 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM1P09493 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TPM1P09493 AC005336.3-201ENST00000623833 2679 ntBASIC2.71□□□□□ -1.98
TPM1P09493 SNORA67.1-201ENST00000364749 141 ntBASIC2.71□□□□□ -1.98
TPM1P09493 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM1P09493 TRIM60P13-201ENST00000432350 1283 ntBASIC2.71□□□□□ -1.98
TPM1P09493 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM1P09493 AL121871.1-201ENST00000443413 436 ntBASIC2.71□□□□□ -1.98
TPM1P09493 AL050341.1-201ENST00000447743 313 ntBASIC2.71□□□□□ -1.98
TPM1P09493 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.71□□□□□ -1.98
TPM1P09493 AC048346.1-201ENST00000510247 144 ntBASIC2.71□□□□□ -1.98
TPM1P09493 RNU6-928P-201ENST00000516876 104 ntBASIC2.71□□□□□ -1.98
TPM1P09493 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM1P09493 AC007115.1-201ENST00000546853 234 ntBASIC2.71□□□□□ -1.98
TPM1P09493 SETP7-201ENST00000552169 453 ntBASIC2.71□□□□□ -1.98
TPM1P09493 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.71□□□□□ -1.98
TPM1P09493 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM1P09493 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.71□□□□□ -1.98
TPM1P09493 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.71□□□□□ -1.98
TPM1P09493 AC002487.1-201ENST00000604565 994 ntBASIC2.71□□□□□ -1.98
TPM1P09493 AL450270.1-201ENST00000606160 391 ntBASIC2.71□□□□□ -1.98
TPM1P09493 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TPM1P09493 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.71□□□□□ -1.98
TPM1P09493 AL359693.1-201ENST00000614959 2407 ntBASIC2.7□□□□□ -1.98
TPM1P09493 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TPM1P09493 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TPM1P09493 SNORA68.1-201ENST00000364537 132 ntBASIC2.7□□□□□ -1.98
TPM1P09493 RNU6-1072P-201ENST00000384703 107 ntBASIC2.7□□□□□ -1.98
TPM1P09493 RNU6-443P-201ENST00000384780 107 ntBASIC2.7□□□□□ -1.98
TPM1P09493 AC016769.3-201ENST00000396562 315 ntBASIC2.7□□□□□ -1.98
TPM1P09493 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.7□□□□□ -1.98
TPM1P09493 FCF1P2-201ENST00000415284 583 ntBASIC2.7□□□□□ -1.98
TPM1P09493 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.7□□□□□ -1.98
TPM1P09493 AL445687.1-201ENST00000439946 251 ntBASIC2.7□□□□□ -1.98
TPM1P09493 RNFT1P2-201ENST00000443064 757 ntBASIC2.7□□□□□ -1.98
TPM1P09493 RNU7-23P-201ENST00000459465 62 ntBASIC2.7□□□□□ -1.98
TPM1P09493 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.7□□□□□ -1.98
TPM1P09493 AC147055.4-201ENST00000504399 745 ntBASIC2.7□□□□□ -1.98
TPM1P09493 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM1P09493 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM1P09493 AC109464.2-201ENST00000510242 943 ntBASIC2.7□□□□□ -1.98
TPM1P09493 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.7□□□□□ -1.98
TPM1P09493 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TPM1P09493 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM1P09493 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM1P09493 MIR4444-1-201ENST00000581696 74 ntBASIC2.7□□□□□ -1.98
TPM1P09493 MIR4444-2-201ENST00000584390 74 ntBASIC2.7□□□□□ -1.98
TPM1P09493 AC133794.1-201ENST00000602731 914 ntBASIC2.7□□□□□ -1.98
TPM1P09493 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.7□□□□□ -1.98
TPM1P09493 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.7□□□□□ -1.98
TPM1P09493 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
TPM1P09493 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TPM1P09493 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
TPM1P09493 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TPM1P09493 AC008432.1-201ENST00000615912 1320 ntBASIC2.69□□□□□ -1.98
TPM1P09493 OR4G11P-202ENST00000642116 1414 ntBASIC2.69□□□□□ -1.98
TPM1P09493 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TPM1P09493 MIRLET7G-201ENST00000362280 84 ntBASIC2.69□□□□□ -1.98
TPM1P09493 RNU6-859P-201ENST00000362728 107 ntBASIC2.69□□□□□ -1.98
TPM1P09493 SNORD116-23-201ENST00000384645 92 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms