Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.33□□□□□ -1.88
VIMP08670 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.33□□□□□ -1.88
VIMP08670 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.33□□□□□ -1.88
VIMP08670 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.33□□□□□ -1.88
VIMP08670 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.33□□□□□ -1.88
VIMP08670 AC004067.1-201ENST00000608733 700 ntBASIC3.33□□□□□ -1.88
VIMP08670 AC072039.2-201ENST00000608883 439 ntBASIC3.33□□□□□ -1.88
VIMP08670 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.33□□□□□ -1.88
VIMP08670 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.33□□□□□ -1.88
VIMP08670 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VIMP08670 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.33□□□□□ -1.88
VIMP08670 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.33□□□□□ -1.88
VIMP08670 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VIMP08670 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.33□□□□□ -1.88
VIMP08670 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VIMP08670 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VIMP08670 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VIMP08670 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.32□□□□□ -1.88
VIMP08670 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.32□□□□□ -1.88
VIMP08670 AC245054.2-201ENST00000415639 319 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.32□□□□□ -1.88
VIMP08670 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VIMP08670 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.32□□□□□ -1.88
VIMP08670 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.32□□□□□ -1.88
VIMP08670 YWHAZP7-201ENST00000436906 631 ntBASIC3.32□□□□□ -1.88
VIMP08670 RSU1P2-202ENST00000437884 485 ntBASIC3.32□□□□□ -1.88
VIMP08670 UQCRHP3-201ENST00000451503 251 ntBASIC3.32□□□□□ -1.88
VIMP08670 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.32□□□□□ -1.88
VIMP08670 AL359385.1-201ENST00000456509 365 ntBASIC3.32□□□□□ -1.88
VIMP08670 SNORD105B-201ENST00000458770 79 ntBASIC3.32□□□□□ -1.88
VIMP08670 RPL7P15-201ENST00000461190 712 ntBASIC3.32□□□□□ -1.88
VIMP08670 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.32□□□□□ -1.88
VIMP08670 RPL31P60-201ENST00000478450 367 ntBASIC3.32□□□□□ -1.88
VIMP08670 VN1R105P-201ENST00000486595 910 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.32□□□□□ -1.88
VIMP08670 MTND5P4-201ENST00000514978 288 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.32□□□□□ -1.88
VIMP08670 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.32□□□□□ -1.88
VIMP08670 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.32□□□□□ -1.88
VIMP08670 OR8R1P-201ENST00000543943 764 ntBASIC3.32□□□□□ -1.88
VIMP08670 OR7K1P-201ENST00000546439 926 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.32□□□□□ -1.88
VIMP08670 AC010653.1-201ENST00000571108 881 ntBASIC3.32□□□□□ -1.88
VIMP08670 MTATP6P24-201ENST00000576835 677 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC015917.1-201ENST00000579654 510 ntBASIC3.32□□□□□ -1.88
VIMP08670 ZNF415P1-201ENST00000582279 1166 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC097468.3-201ENST00000607956 456 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC009570.1-201ENST00000609599 745 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.32□□□□□ -1.88
VIMP08670 AC009464.1-201ENST00000615731 469 ntBASIC3.32□□□□□ -1.88
VIMP08670 ZYXP1-201ENST00000617638 118 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC091903.1-201ENST00000624322 454 ntBASIC3.32□□□□□ -1.88
VIMP08670 AC008993.2-201ENST00000631744 806 ntBASIC3.32□□□□□ -1.88
VIMP08670 LRRC77P-213ENST00000637727 880 ntBASIC3.32□□□□□ -1.88
VIMP08670 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.32□□□□□ -1.88
VIMP08670 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VIMP08670 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.32□□□□□ -1.88
VIMP08670 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VIMP08670 AC090740.1-201ENST00000623193 2262 ntBASIC3.32□□□□□ -1.88
VIMP08670 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VIMP08670 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VIMP08670 AC012321.1-201ENST00000561622 1588 ntBASIC3.31□□□□□ -1.88
VIMP08670 AC005832.2-201ENST00000538921 1430 ntBASIC3.31□□□□□ -1.88
VIMP08670 AL391994.1-201ENST00000254724 282 ntBASIC3.31□□□□□ -1.88
VIMP08670 RNU5E-8P-201ENST00000363502 116 ntBASIC3.31□□□□□ -1.88
VIMP08670 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
VIMP08670 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VIMP08670 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.31□□□□□ -1.88
VIMP08670 SNORA46-201ENST00000384762 135 ntBASIC3.31□□□□□ -1.88
VIMP08670 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.31□□□□□ -1.88
VIMP08670 PPP1R11P2-201ENST00000423543 382 ntBASIC3.31□□□□□ -1.88
VIMP08670 AC010099.3-201ENST00000423896 409 ntBASIC3.31□□□□□ -1.88
VIMP08670 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.31□□□□□ -1.88
VIMP08670 RPL27AP8-201ENST00000424277 446 ntBASIC3.31□□□□□ -1.88
VIMP08670 AL445669.1-201ENST00000426743 755 ntBASIC3.31□□□□□ -1.88
VIMP08670 AC108734.1-201ENST00000439549 399 ntBASIC3.31□□□□□ -1.88
VIMP08670 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
VIMP08670 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VIMP08670 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VIMP08670 AL359273.1-201ENST00000510918 627 ntBASIC3.31□□□□□ -1.88
VIMP08670 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.31□□□□□ -1.88
VIMP08670 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.31□□□□□ -1.88
VIMP08670 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.31□□□□□ -1.88
VIMP08670 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.31□□□□□ -1.88
VIMP08670 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
VIMP08670 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.31□□□□□ -1.88
VIMP08670 AC090888.2-201ENST00000559765 1144 ntBASIC3.31□□□□□ -1.88
VIMP08670 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.31□□□□□ -1.88
VIMP08670 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.31□□□□□ -1.88
VIMP08670 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.31□□□□□ -1.88
VIMP08670 AP000254.1-201ENST00000609934 520 ntBASIC3.31□□□□□ -1.88
VIMP08670 AC002076.2-201ENST00000617362 122 ntBASIC3.31□□□□□ -1.88
VIMP08670 AL356863.1-201ENST00000623378 1080 ntBASIC3.31□□□□□ -1.88
VIMP08670 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.31□□□□□ -1.88
VIMP08670 AC119674.1-207ENST00000641355 633 ntBASIC3.31□□□□□ -1.88
VIMP08670 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.31□□□□□ -1.88
VIMP08670 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VIMP08670 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VIMP08670 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.31□□□□□ -1.88
VIMP08670 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms