Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MMP3P08254 Y_RNA.493-201ENST00000384422 102 ntBASIC3.89□□□□□ -1.79
MMP3P08254 HSPE1P8-201ENST00000406997 288 ntBASIC3.89□□□□□ -1.79
MMP3P08254 MIR1305-201ENST00000408300 86 ntBASIC3.89□□□□□ -1.79
MMP3P08254 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.89□□□□□ -1.79
MMP3P08254 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.89□□□□□ -1.79
MMP3P08254 AF274854.1-201ENST00000413236 615 ntBASIC3.89□□□□□ -1.79
MMP3P08254 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.89□□□□□ -1.79
MMP3P08254 RPL21P32-201ENST00000419877 477 ntBASIC3.89□□□□□ -1.79
MMP3P08254 AC012065.2-201ENST00000421295 375 ntBASIC3.89□□□□□ -1.79
MMP3P08254 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.89□□□□□ -1.79
MMP3P08254 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.89□□□□□ -1.79
MMP3P08254 MUPP-201ENST00000438111 566 ntBASIC3.89□□□□□ -1.79
MMP3P08254 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MMP3P08254 AC023598.1-201ENST00000472521 361 ntBASIC3.89□□□□□ -1.79
MMP3P08254 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.89□□□□□ -1.79
MMP3P08254 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.89□□□□□ -1.79
MMP3P08254 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MMP3P08254 CBX3P5-201ENST00000552017 521 ntBASIC3.89□□□□□ -1.79
MMP3P08254 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.89□□□□□ -1.79
MMP3P08254 AL161713.1-201ENST00000555538 145 ntBASIC3.89□□□□□ -1.79
MMP3P08254 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.89□□□□□ -1.79
MMP3P08254 MIR4528-201ENST00000577763 90 ntBASIC3.89□□□□□ -1.79
MMP3P08254 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.89□□□□□ -1.79
MMP3P08254 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.89□□□□□ -1.79
MMP3P08254 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.89□□□□□ -1.79
MMP3P08254 VN1R79P-201ENST00000593540 513 ntBASIC3.89□□□□□ -1.79
MMP3P08254 KLKP1-201ENST00000595979 403 ntBASIC3.89□□□□□ -1.79
MMP3P08254 RPL23AP92-201ENST00000603609 255 ntBASIC3.89□□□□□ -1.79
MMP3P08254 AC080078.2-201ENST00000603766 501 ntBASIC3.89□□□□□ -1.79
MMP3P08254 AC091805.2-201ENST00000603848 235 ntBASIC3.89□□□□□ -1.79
MMP3P08254 AP003117.2-201ENST00000606010 545 ntBASIC3.89□□□□□ -1.79
MMP3P08254 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.89□□□□□ -1.79
MMP3P08254 AL359715.5-201ENST00000623431 443 ntBASIC3.89□□□□□ -1.79
MMP3P08254 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.89□□□□□ -1.79
MMP3P08254 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.89□□□□□ -1.79
MMP3P08254 AC011978.2-201ENST00000569835 2054 ntBASIC3.89□□□□□ -1.79
MMP3P08254 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
MMP3P08254 DCAF13P1-201ENST00000495256 1330 ntBASIC3.89□□□□□ -1.79
MMP3P08254 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MMP3P08254 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MMP3P08254 AL356274.2-201ENST00000624379 3752 ntBASIC3.88□□□□□ -1.79
MMP3P08254 NUP58P1-201ENST00000502546 1738 ntBASIC3.88□□□□□ -1.79
MMP3P08254 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
MMP3P08254 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MMP3P08254 SNORA38.1-201ENST00000364172 131 ntBASIC3.88□□□□□ -1.79
MMP3P08254 RNU6-878P-201ENST00000384578 110 ntBASIC3.88□□□□□ -1.79
MMP3P08254 MIR128-1-201ENST00000384921 82 ntBASIC3.88□□□□□ -1.79
MMP3P08254 RPS3AP36-201ENST00000398190 775 ntBASIC3.88□□□□□ -1.79
MMP3P08254 RN7SKP111-201ENST00000410349 271 ntBASIC3.88□□□□□ -1.79
MMP3P08254 RNU2-66P-201ENST00000410650 161 ntBASIC3.88□□□□□ -1.79
MMP3P08254 RPL31P2-201ENST00000413849 377 ntBASIC3.88□□□□□ -1.79
MMP3P08254 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.88□□□□□ -1.79
MMP3P08254 MTCO2P5-201ENST00000422621 426 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.88□□□□□ -1.79
MMP3P08254 AC109583.1-201ENST00000432156 268 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.88□□□□□ -1.79
MMP3P08254 AC091862.1-201ENST00000438016 1100 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.88□□□□□ -1.79
MMP3P08254 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.88□□□□□ -1.79
MMP3P08254 KLF3P2-201ENST00000465138 268 ntBASIC3.88□□□□□ -1.79
MMP3P08254 RN7SL594P-201ENST00000470590 287 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AP001025.2-201ENST00000490908 477 ntBASIC3.88□□□□□ -1.79
MMP3P08254 OR5H5P-201ENST00000503164 928 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AC139783.2-201ENST00000504847 1145 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.88□□□□□ -1.79
MMP3P08254 AC010342.1-201ENST00000514047 877 ntBASIC3.88□□□□□ -1.79
MMP3P08254 RNU6-720P-201ENST00000516363 108 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.88□□□□□ -1.79
MMP3P08254 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MMP3P08254 ZNF519P3-201ENST00000557158 1032 ntBASIC3.88□□□□□ -1.79
MMP3P08254 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.88□□□□□ -1.79
MMP3P08254 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.88□□□□□ -1.79
MMP3P08254 AC005771.1-201ENST00000585581 349 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AC112191.3-201ENST00000604371 277 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AL589743.7-201ENST00000612637 233 ntBASIC3.88□□□□□ -1.79
MMP3P08254 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.88□□□□□ -1.79
MMP3P08254 AC008250.2-201ENST00000615261 205 ntBASIC3.88□□□□□ -1.79
MMP3P08254 MIR8057-201ENST00000620957 69 ntBASIC3.88□□□□□ -1.79
MMP3P08254 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.88□□□□□ -1.79
MMP3P08254 MFSD8-233ENST00000641482 4860 ntBASIC3.88□□□□□ -1.79
MMP3P08254 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MMP3P08254 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MMP3P08254 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MMP3P08254 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MMP3P08254 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MMP3P08254 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.87□□□□□ -1.79
MMP3P08254 CCT4P2-201ENST00000233836 1548 ntBASIC3.87□□□□□ -1.79
MMP3P08254 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
MMP3P08254 RNU6-989P-201ENST00000362756 107 ntBASIC3.87□□□□□ -1.79
MMP3P08254 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.87□□□□□ -1.79
MMP3P08254 RNU6-339P-201ENST00000384310 107 ntBASIC3.87□□□□□ -1.79
MMP3P08254 RNU6-1215P-201ENST00000384441 102 ntBASIC3.87□□□□□ -1.79
MMP3P08254 Y_RNA.548-201ENST00000384656 105 ntBASIC3.87□□□□□ -1.79
MMP3P08254 U3.19-201ENST00000390893 196 ntBASIC3.87□□□□□ -1.79
MMP3P08254 MTND4LP20-201ENST00000402379 270 ntBASIC3.87□□□□□ -1.79
MMP3P08254 RN7SKP56-201ENST00000410513 331 ntBASIC3.87□□□□□ -1.79
MMP3P08254 RNU2-15P-201ENST00000410692 191 ntBASIC3.87□□□□□ -1.79
MMP3P08254 RNA5SP104-201ENST00000410989 118 ntBASIC3.87□□□□□ -1.79
MMP3P08254 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms