Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MTND5P7-201ENST00000413558 1798 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 OR4G1P-203ENST00000641984 1631 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.55□□□□□ -2.16
SPTA1P02549 AP000852.1-201ENST00000472460 573 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 MTCYBP17-201ENST00000503579 789 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 AC087854.1-201ENST00000519706 414 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.55□□□□□ -2.16
SPTA1P02549 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.55□□□□□ -2.16
SPTA1P02549 AL627230.5-201ENST00000619807 58 ntBASIC1.55□□□□□ -2.16
SPTA1P02549 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SPTA1P02549 ZNF720P1-201ENST00000562403 1939 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AL096701.2-201ENST00000416920 238 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 FNDC3CP-201ENST00000420795 1155 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTA1P02549 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTA1P02549 AP002345.1-201ENST00000456493 928 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 VTA1P2-201ENST00000520205 911 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTA1P02549 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 STMN1P1-201ENST00000617809 440 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AP003499.2-201ENST00000624100 483 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 CKAP2P1-201ENST00000555477 2049 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
SPTA1P02549 XKRYP4-201ENST00000414395 483 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 TOMM22P1-201ENST00000418578 312 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 MTCYBP7-201ENST00000419540 1134 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 XKRY2-201ENST00000442362 1093 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 XKRYP5-201ENST00000449659 483 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 RPS3AP22-201ENST00000488297 769 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 KATNBL1P4-201ENST00000503545 918 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AC021087.2-201ENST00000504656 1203 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 HMGB1P47-201ENST00000511281 589 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTA1P02549 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTA1P02549 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTA1P02549 MIR4421-201ENST00000578133 69 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AC096720.1-201ENST00000604441 183 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 U73479.1-201ENST00000618062 168 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 AC008133.2-201ENST00000624540 351 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 MKKS-204ENST00000639674 192 ntBASIC1.54□□□□□ -2.16
SPTA1P02549 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SPTA1P02549 AC000367.1-201ENST00000452711 1766 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 AC007256.1-201ENST00000392253 2765 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SPTA1P02549 XIAPP3-201ENST00000312918 795 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 TPT1P14-201ENST00000448018 505 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 RN7SL274P-201ENST00000492268 272 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 AC004486.1-201ENST00000546846 233 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 AC034268.2-201ENST00000571784 482 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTA1P02549 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.53□□□□□ -2.16
SPTA1P02549 TEX21P-201ENST00000447107 1476 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 AP001148.1-201ENST00000624124 2359 ntBASIC1.53□□□□□ -2.16
SPTA1P02549 AC110774.1-201ENST00000623567 2018 ntBASIC1.53□□□□□ -2.17
SPTA1P02549 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
SPTA1P02549 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
SPTA1P02549 RNA5SP160-201ENST00000364866 120 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 RNU6-882P-201ENST00000391025 103 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 RAD23BP2-201ENST00000416003 1207 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 AC007560.1-201ENST00000426912 237 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 ARPC3P1-201ENST00000437218 533 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.52□□□□□ -2.17
SPTA1P02549 AC021382.1-201ENST00000483523 359 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.52□□□□□ -2.17
SPTA1P02549 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTA1P02549 NIFKP8-201ENST00000560500 874 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 PSMA6P4-201ENST00000603247 718 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SPTA1P02549 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.52□□□□□ -2.17
SPTA1P02549 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SPTA1P02549 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
SPTA1P02549 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SPTA1P02549 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.52□□□□□ -2.17
SPTA1P02549 AF274854.1-201ENST00000413236 615 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTA1P02549 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.52□□□□□ -2.17
SPTA1P02549 GZMAP1-201ENST00000503054 631 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 RPS27AP18-201ENST00000515536 459 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTA1P02549 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
SPTA1P02549 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTA1P02549 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.52□□□□□ -2.17
SPTA1P02549 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.52□□□□□ -2.17
SPTA1P02549 7SK.7-201ENST00000603504 247 ntBASIC1.52□□□□□ -2.17
SPTA1P02549 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
SPTA1P02549 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTA1P02549 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPTA1P02549 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SPTA1P02549 U3.37-201ENST00000408528 213 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 POLHP1-201ENST00000411806 470 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.51□□□□□ -2.17
SPTA1P02549 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
SPTA1P02549 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.51□□□□□ -2.17
SPTA1P02549 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SPTA1P02549 ATG10-AS1-201ENST00000504846 648 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 RNU1-40P-201ENST00000516816 164 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 RNU1-97P-201ENST00000516872 164 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms