Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 USP9YP25-201ENST00000457708 443 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 RPL31P60-201ENST00000478450 367 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC090525.1-201ENST00000479116 478 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AP002812.1-201ENST00000495378 474 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC109464.2-201ENST00000510242 943 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 SNORA9.3-201ENST00000516383 129 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 SNORD59.2-201ENST00000516873 68 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AP001804.3-201ENST00000525146 880 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 HIGD1AP1-201ENST00000550979 275 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 CYCSP2-201ENST00000558168 301 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 MIR5186-201ENST00000577504 120 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 MIR3922-201ENST00000585192 84 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 MTCO2P2-201ENST00000591258 225 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC245389.1-201ENST00000605141 529 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC073657.2-201ENST00000605661 303 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC006270.3-201ENST00000605967 1036 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC009974.1-201ENST00000608881 455 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AL450472.3-201ENST00000615578 367 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AL355365.1-201ENST00000616480 294 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC109809.1-201ENST00000619665 545 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AL445264.1-201ENST00000621719 171 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 AC244258.1-201ENST00000637553 1071 ntBASIC2.25□□□□□ -2.05
HLA-DQA1P01909 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQA1P01909 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 RNU6-621P-201ENST00000364752 109 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 RPS3AP24-201ENST00000407896 734 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 MIR1284-201ENST00000408337 120 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 BX119904.4-201ENST00000424402 301 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 MTATP6P4-201ENST00000427725 675 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 USP9YP24-201ENST00000434374 697 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 MTCO2P20-201ENST00000437339 673 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 THAP5P1-201ENST00000439089 262 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 USP9YP17-201ENST00000444617 696 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 EEF1E1P1-201ENST00000446998 430 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC002381.1-201ENST00000447049 280 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 PTENP1-201ENST00000447117 1215 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 VN1R34P-201ENST00000447387 883 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 PDSS1P2-201ENST00000449397 678 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 PRSS3P4-201ENST00000453323 162 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC092155.2-201ENST00000454675 477 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 RPL30P9-201ENST00000465586 330 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AL672167.3-201ENST00000465951 960 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 RPS29P2-201ENST00000479278 136 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC108729.1-201ENST00000487812 947 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 WBP1LP4-201ENST00000505043 344 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 DUXAP2-201ENST00000519198 589 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC125611.2-201ENST00000551907 647 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AP005205.1-201ENST00000563503 508 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC090615.1-201ENST00000577519 154 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 ZNF415P1-201ENST00000582279 1166 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 MIR3158-1-201ENST00000583596 81 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 RPP40P2-201ENST00000603596 712 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC080013.3-201ENST00000606839 578 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms