Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.59□□□□□ -2.16
ABCA1O95477 AC011890.2-201ENST00000613393 294 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 AL136520.1-201ENST00000600311 1322 ntBASIC1.59□□□□□ -2.16
ABCA1O95477 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ABCA1O95477 SNORD56.5-201ENST00000364281 72 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
ABCA1O95477 AL591034.1-201ENST00000407447 340 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 RNA5SP338-201ENST00000410495 85 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 RNA5SP270-201ENST00000411361 118 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 AF274854.1-201ENST00000413236 615 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 AP1B1P2-201ENST00000416196 106 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.58□□□□□ -2.16
ABCA1O95477 AL157827.1-201ENST00000447622 132 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 AP003717.3-201ENST00000544832 1180 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 AC009314.1-201ENST00000603871 304 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 AC092954.1-201ENST00000609121 445 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 AL391834.1-201ENST00000609609 560 ntBASIC1.58□□□□□ -2.16
ABCA1O95477 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
ABCA1O95477 SNORD114-26-201ENST00000363543 72 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA1O95477 MTND5P4-201ENST00000514978 288 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 RNU1-40P-201ENST00000516816 164 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 RNU1-97P-201ENST00000516872 164 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 HMGN1P28-201ENST00000521340 364 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.57□□□□□ -2.16
ABCA1O95477 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.57□□□□□ -2.16
ABCA1O95477 RPS3AP4-201ENST00000555161 764 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 RPS3AP23-202ENST00000574601 686 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA1O95477 AC090616.5-202ENST00000582111 297 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 RPL23AP78-201ENST00000599928 470 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AC108479.2-201ENST00000617314 601 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AL121594.5-201ENST00000631724 573 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 MTCO1P6-201ENST00000481192 1384 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AP002907.1-201ENST00000606361 1430 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
ABCA1O95477 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.57□□□□□ -2.16
ABCA1O95477 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ABCA1O95477 RNU6-392P-201ENST00000364926 101 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.57□□□□□ -2.16
ABCA1O95477 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AC003989.2-201ENST00000440224 169 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 RPS7P5-201ENST00000441482 581 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.57□□□□□ -2.16
ABCA1O95477 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA1O95477 AC098799.2-201ENST00000509466 868 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 snoZ278.1-201ENST00000517059 112 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.57□□□□□ -2.16
ABCA1O95477 DNAJC8P1-201ENST00000554535 372 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 HSPE1P14-201ENST00000605812 302 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 U73479.1-201ENST00000618062 168 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AC010872.1-201ENST00000624225 675 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 FAM157B-203ENST00000639350 358 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
ABCA1O95477 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
ABCA1O95477 KPNA2P1-201ENST00000458289 1591 ntBASIC1.57□□□□□ -2.16
ABCA1O95477 AC096533.1-201ENST00000411645 353 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.56□□□□□ -2.16
ABCA1O95477 RPS7P2-201ENST00000435134 607 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 DNAJC19P4-201ENST00000440115 345 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.56□□□□□ -2.16
ABCA1O95477 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ABCA1O95477 RNU1-61P-201ENST00000516107 151 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ABCA1O95477 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.56□□□□□ -2.16
ABCA1O95477 ARL2BPP2-201ENST00000550907 489 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 AL133393.1-201ENST00000603277 287 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 MIR6076-201ENST00000617521 113 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.56□□□□□ -2.16
ABCA1O95477 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
ABCA1O95477 AL109809.4-201ENST00000603520 2185 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 U8.10-201ENST00000384260 133 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 AP000790.1-201ENST00000528891 737 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ABCA1O95477 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ABCA1O95477 SNORA4-201ENST00000584302 138 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 FAM60CP-201ENST00000591086 664 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 AC055764.2-201ENST00000610089 670 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 MIR6864-201ENST00000617935 70 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.56□□□□□ -2.16
ABCA1O95477 MFSD8-245ENST00000641743 948 ntBASIC1.56□□□□□ -2.16
ABCA1O95477 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
ABCA1O95477 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
ABCA1O95477 RNA5SP190-201ENST00000365222 118 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 USP9YP6-201ENST00000413550 854 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 MTCO3P30-201ENST00000426425 670 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 WARS2P1-201ENST00000429678 537 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 MED6P1-201ENST00000439659 713 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 ELOCP13-201ENST00000443934 329 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 Z77249.1-201ENST00000444622 1175 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.55□□□□□ -2.16
ABCA1O95477 AC093392.2-201ENST00000450682 337 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 HMGB1P26-201ENST00000452520 628 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 USP9YP34-201ENST00000453983 808 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 SNRPFP4-201ENST00000456366 242 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 HMGN2P13-201ENST00000476476 274 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 AP001960.1-201ENST00000506494 658 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms