Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF40O75150 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF40O75150 MAPK10-338ENST00000641647 3362 ntBASIC6.27□□□□□ -1.41
RNF40O75150 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
RNF40O75150 MAPK10-328ENST00000641553 4009 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AP001029.2-203ENST00000589795 4910 ntBASIC6.26□□□□□ -1.41
RNF40O75150 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF40O75150 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF40O75150 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF40O75150 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF40O75150 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
RNF40O75150 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
RNF40O75150 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF40O75150 RNU6-937P-201ENST00000384325 106 ntBASIC6.26□□□□□ -1.41
RNF40O75150 Y_RNA.497-201ENST00000384447 98 ntBASIC6.26□□□□□ -1.41
RNF40O75150 MIR578-201ENST00000384828 96 ntBASIC6.26□□□□□ -1.41
RNF40O75150 Y_RNA.580-201ENST00000391004 95 ntBASIC6.26□□□□□ -1.41
RNF40O75150 HSPE1P8-201ENST00000406997 288 ntBASIC6.26□□□□□ -1.41
RNF40O75150 RNU5E-9P-201ENST00000411164 104 ntBASIC6.26□□□□□ -1.41
RNF40O75150 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF40O75150 AL035461.1-201ENST00000421490 332 ntBASIC6.26□□□□□ -1.41
RNF40O75150 AL035660.1-201ENST00000422041 222 ntBASIC6.26□□□□□ -1.41
RNF40O75150 AC010154.1-201ENST00000425857 269 ntBASIC6.26□□□□□ -1.41
RNF40O75150 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF40O75150 AC023141.9-201ENST00000458734 412 ntBASIC6.26□□□□□ -1.41
RNF40O75150 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF40O75150 AC140059.1-201ENST00000489238 361 ntBASIC6.26□□□□□ -1.41
RNF40O75150 RNU6-1219P-201ENST00000516143 112 ntBASIC6.26□□□□□ -1.41
RNF40O75150 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF40O75150 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
RNF40O75150 AC090022.1-201ENST00000546569 311 ntBASIC6.26□□□□□ -1.41
RNF40O75150 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF40O75150 RN7SL652P-201ENST00000577769 300 ntBASIC6.26□□□□□ -1.41
RNF40O75150 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF40O75150 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF40O75150 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF40O75150 MIR6809-201ENST00000612189 116 ntBASIC6.26□□□□□ -1.41
RNF40O75150 MIR6826-201ENST00000617808 98 ntBASIC6.26□□□□□ -1.41
RNF40O75150 AL049767.1-202ENST00000637826 242 ntBASIC6.26□□□□□ -1.41
RNF40O75150 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RNF40O75150 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF40O75150 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF40O75150 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
RNF40O75150 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RNF40O75150 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF40O75150 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
RNF40O75150 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
RNF40O75150 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
RNF40O75150 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 DDX10P1-201ENST00000448545 1933 ntBASIC6.25□□□□□ -1.41
RNF40O75150 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RNF40O75150 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
RNF40O75150 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RNF40O75150 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 RNU4-90P-201ENST00000362773 141 ntBASIC6.25□□□□□ -1.41
RNF40O75150 RNA5SP205-201ENST00000364653 136 ntBASIC6.25□□□□□ -1.41
RNF40O75150 RNA5SP187-201ENST00000384400 119 ntBASIC6.25□□□□□ -1.41
RNF40O75150 RNU6-1035P-201ENST00000384477 107 ntBASIC6.25□□□□□ -1.41
RNF40O75150 Y_RNA.586-201ENST00000391146 98 ntBASIC6.25□□□□□ -1.41
RNF40O75150 SNRPEP6-201ENST00000407465 277 ntBASIC6.25□□□□□ -1.41
RNF40O75150 RN7SKP286-201ENST00000410894 299 ntBASIC6.25□□□□□ -1.41
RNF40O75150 EI24P1-201ENST00000416584 867 ntBASIC6.25□□□□□ -1.41
RNF40O75150 DPPA2P2-201ENST00000418220 897 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF40O75150 BX323845.3-201ENST00000428215 527 ntBASIC6.25□□□□□ -1.41
RNF40O75150 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF40O75150 ELOCP18-201ENST00000434209 337 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF40O75150 AL162725.1-201ENST00000435405 301 ntBASIC6.25□□□□□ -1.41
RNF40O75150 OR6D1P-201ENST00000436165 939 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AC006511.1-201ENST00000470614 315 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AC092865.4-201ENST00000477936 615 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AC124945.1-201ENST00000485133 188 ntBASIC6.25□□□□□ -1.41
RNF40O75150 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF40O75150 RNU6-1012P-201ENST00000516606 109 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AC027308.1-201ENST00000517993 110 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.25□□□□□ -1.41
RNF40O75150 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.25□□□□□ -1.41
RNF40O75150 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.25□□□□□ -1.41
RNF40O75150 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
RNF40O75150 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF40O75150 SNORD95-201ENST00000579879 68 ntBASIC6.25□□□□□ -1.41
RNF40O75150 MIR5692A1-201ENST00000580523 69 ntBASIC6.25□□□□□ -1.41
RNF40O75150 MIR4433B-201ENST00000581329 102 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AC123912.5-201ENST00000605470 343 ntBASIC6.25□□□□□ -1.41
RNF40O75150 MIR15A-201ENST00000607334 83 ntBASIC6.25□□□□□ -1.41
RNF40O75150 AC009318.2-201ENST00000610917 651 ntBASIC6.25□□□□□ -1.41
RNF40O75150 RN7SL787P-201ENST00000613000 284 ntBASIC6.25□□□□□ -1.41
RNF40O75150 SNORD39.4-201ENST00000620099 78 ntBASIC6.25□□□□□ -1.41
RNF40O75150 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF40O75150 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.25□□□□□ -1.41
RNF40O75150 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF40O75150 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms