Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 Y_RNA.618-201ENST00000410949 107 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 RPS12P5-201ENST00000423449 371 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCD1O75127 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCD1O75127 GEMIN8P3-201ENST00000445417 720 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 AC087385.1-201ENST00000475062 312 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.93□□□□□ -1.46
PTCD1O75127 Y_RNA.654-201ENST00000497848 106 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 AC135721.1-201ENST00000497954 479 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.93□□□□□ -1.46
PTCD1O75127 HMGB3P15-201ENST00000507326 574 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCD1O75127 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCD1O75127 RPL39P5-202ENST00000512505 151 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 AC026801.2-201ENST00000515352 425 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 SNORA70.11-201ENST00000515987 138 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 SNORA70.13-201ENST00000516116 138 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 RN7SKP277-201ENST00000516895 283 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 IGKV2D-36-201ENST00000518643 226 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTCD1O75127 AL163153.1-201ENST00000554223 283 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 AC008269.2-201ENST00000561915 1105 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 BNIP3P25-201ENST00000596023 559 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 DPPA3P3-201ENST00000603842 430 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 U4.1-201ENST00000620349 87 ntBASIC5.93□□□□□ -1.46
PTCD1O75127 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
PTCD1O75127 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTCD1O75127 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.93□□□□□ -1.46
PTCD1O75127 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCD1O75127 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCD1O75127 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCD1O75127 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCD1O75127 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCD1O75127 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCD1O75127 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTCD1O75127 RNA5SP388-201ENST00000362584 119 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 SNORD115-7-201ENST00000365306 82 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCD1O75127 AL592114.1-201ENST00000403842 483 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 AL359643.1-201ENST00000404109 423 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 RNU6-370P-201ENST00000411008 104 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 AC011933.1-201ENST00000413334 321 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 E2F6P2-201ENST00000420708 748 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCD1O75127 RPL35AP21-201ENST00000437667 333 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCD1O75127 CYCSP24-201ENST00000445119 316 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCD1O75127 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCD1O75127 AC116533.1-201ENST00000459748 321 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCD1O75127 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCD1O75127 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCD1O75127 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
PTCD1O75127 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.92□□□□□ -1.46
PTCD1O75127 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCD1O75127 AP000889.2-201ENST00000532684 490 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCD1O75127 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCD1O75127 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCD1O75127 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.92□□□□□ -1.46
PTCD1O75127 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTCD1O75127 AC091979.2-201ENST00000607514 214 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.92□□□□□ -1.46
PTCD1O75127 ZYXP1-201ENST00000617638 118 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 AC007546.1-201ENST00000619452 559 ntBASIC5.92□□□□□ -1.46
PTCD1O75127 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCD1O75127 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCD1O75127 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PTCD1O75127 AC009951.1-201ENST00000623674 2614 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
PTCD1O75127 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PTCD1O75127 Y_RNA.339-201ENST00000365325 102 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 SNORA70C-201ENST00000384538 135 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 MIR548K-201ENST00000408406 116 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 AC074085.1-201ENST00000413598 418 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 RPS12P10-201ENST00000427031 377 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 AC093106.2-201ENST00000428212 385 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCD1O75127 AC005019.1-201ENST00000436455 431 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 RPL35AP22-201ENST00000436855 335 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCD1O75127 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCD1O75127 RN7SL810P-201ENST00000493031 276 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 AC025164.1-201ENST00000496249 478 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCD1O75127 AC104806.1-201ENST00000508720 308 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCD1O75127 AC022634.1-201ENST00000520765 532 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 AP000827.1-201ENST00000527814 258 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.91□□□□□ -1.46
PTCD1O75127 AL137161.1-201ENST00000532231 390 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.91□□□□□ -1.46
PTCD1O75127 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCD1O75127 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.91□□□□□ -1.46
PTCD1O75127 AC244517.12-201ENST00000623581 663 ntBASIC5.91□□□□□ -1.46
PTCD1O75127 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.91□□□□□ -1.46
PTCD1O75127 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTCD1O75127 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTCD1O75127 STX3-208ENST00000641815 3236 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms