Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.54□□□□□ -2.16
SSSCA1O60232 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SSSCA1O60232 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SSSCA1O60232 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SSSCA1O60232 MIR676-201ENST00000390702 67 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.53□□□□□ -2.16
SSSCA1O60232 CIR1P3-201ENST00000405137 479 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AC105402.1-201ENST00000413336 545 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.53□□□□□ -2.16
SSSCA1O60232 AC007560.1-201ENST00000426912 237 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 MTCO1P45-201ENST00000431457 267 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 SDCBPP1-201ENST00000440192 890 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.53□□□□□ -2.16
SSSCA1O60232 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.53□□□□□ -2.16
SSSCA1O60232 AL359385.1-201ENST00000456509 365 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AL672167.3-201ENST00000465951 960 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 SETP6-201ENST00000479329 568 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 ZNF90P1-201ENST00000480493 1951 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.53□□□□□ -2.16
SSSCA1O60232 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.53□□□□□ -2.16
SSSCA1O60232 AC108157.1-201ENST00000510511 539 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AC004944.1-201ENST00000517807 3059 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 BTF3P12-201ENST00000519620 469 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 SNRPGP16-201ENST00000533275 226 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 CYCSP26-201ENST00000534107 320 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 GLYCAM1-201ENST00000546596 285 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AC026464.5-201ENST00000562497 722 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AC023824.2-201ENST00000566185 400 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AC012493.3-201ENST00000604494 112 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SSSCA1O60232 AC244517.12-201ENST00000623581 663 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.53□□□□□ -2.16
SSSCA1O60232 AP001002.2-201ENST00000625137 386 ntBASIC1.53□□□□□ -2.16
SSSCA1O60232 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.53□□□□□ -2.16
SSSCA1O60232 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.53□□□□□ -2.16
SSSCA1O60232 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.52□□□□□ -2.17
SSSCA1O60232 AL022578.1-201ENST00000439330 1433 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SSSCA1O60232 MIR491-201ENST00000384877 84 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 SFR1P1-201ENST00000403720 688 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 AL023284.1-201ENST00000403956 276 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 AL024474.1-201ENST00000404655 591 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SSSCA1O60232 ARF4P4-201ENST00000439608 520 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.52□□□□□ -2.17
SSSCA1O60232 OSTCP8-201ENST00000445117 448 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SSSCA1O60232 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.52□□□□□ -2.17
SSSCA1O60232 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SSSCA1O60232 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.52□□□□□ -2.17
SSSCA1O60232 PPP1R2P5-201ENST00000457256 603 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 NAP1L1P3-201ENST00000462291 880 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.52□□□□□ -2.17
SSSCA1O60232 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.52□□□□□ -2.17
SSSCA1O60232 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.52□□□□□ -2.17
SSSCA1O60232 AP001317.1-201ENST00000531194 960 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 AC068339.2-201ENST00000534395 618 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SSSCA1O60232 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.52□□□□□ -2.17
SSSCA1O60232 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.52□□□□□ -2.17
SSSCA1O60232 AL669831.4-202ENST00000590817 238 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 KATNBL1P1-201ENST00000605192 748 ntBASIC1.52□□□□□ -2.17
SSSCA1O60232 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SSSCA1O60232 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSSCA1O60232 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSSCA1O60232 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSSCA1O60232 RNU6-1243P-201ENST00000364028 107 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 MIR493-201ENST00000385254 89 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 MT-TC-201ENST00000387405 66 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSSCA1O60232 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 AL023807.1-201ENST00000407932 359 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 RNU4-53P-201ENST00000410828 140 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 AC096664.2-201ENST00000411843 406 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 ZNF90P2-204ENST00000419323 1075 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 AL139413.1-201ENST00000421309 217 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 AL451062.2-201ENST00000427515 271 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 AC092017.2-201ENST00000427600 362 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 AC009237.8-201ENST00000445492 379 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 OR6K5P-201ENST00000447050 945 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 TPT1P14-201ENST00000448018 505 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 HMGN1P5-201ENST00000448591 263 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 ANKRD26P4-201ENST00000455755 950 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
SSSCA1O60232 AC004924.1-201ENST00000480160 781 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 RPS29P20-201ENST00000489592 171 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.51□□□□□ -2.17
SSSCA1O60232 RNU2-44P-201ENST00000516795 194 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SSSCA1O60232 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.51□□□□□ -2.17
SSSCA1O60232 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.51□□□□□ -2.17
SSSCA1O60232 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 AC090897.2-201ENST00000581715 130 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 AC107214.2-201ENST00000608204 634 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms