Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 MIR4286-201ENST00000580651 93 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF3O43395 HMGN1P30-201ENST00000589286 268 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 AC073648.5-201ENST00000603502 305 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC015871.2-201ENST00000603605 948 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC091805.2-201ENST00000603848 235 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC245517.5-201ENST00000611529 162 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC013562.2-201ENST00000611632 603 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC091304.9-201ENST00000612091 226 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AC087241.4-201ENST00000612441 480 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 AL450472.3-201ENST00000615578 367 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF3O43395 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.47□□□□□ -1.69
PRPF3O43395 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PRPF3O43395 AC092326.2-201ENST00000624772 1561 ntBASIC4.47□□□□□ -1.69
PRPF3O43395 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PRPF3O43395 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF3O43395 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF3O43395 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF3O43395 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PRPF3O43395 AC009812.4-201ENST00000569134 1805 ntBASIC4.46□□□□□ -1.69
PRPF3O43395 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF3O43395 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF3O43395 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.46□□□□□ -1.69
PRPF3O43395 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PRPF3O43395 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF3O43395 RNY1P12-201ENST00000364251 105 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.46□□□□□ -1.7
PRPF3O43395 HMGB3P23-201ENST00000414981 585 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 PPP1R11P2-201ENST00000423543 382 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 AC019097.1-201ENST00000424783 735 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 USP9YP14-201ENST00000430663 563 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF3O43395 RPL7P28-201ENST00000437739 740 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF3O43395 USP9YP15-201ENST00000442391 422 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 AL022238.1-201ENST00000442557 355 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 AL162389.1-201ENST00000449233 177 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 GAPDHP17-201ENST00000449858 1001 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 KLF3P2-201ENST00000465138 268 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 RPS27AP1-201ENST00000475545 471 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 MTND1P3-201ENST00000484956 952 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 VN1R105P-201ENST00000486595 910 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF3O43395 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF3O43395 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF3O43395 RNA5SP468-201ENST00000516782 93 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 RNU6-352P-201ENST00000516908 107 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 AL133271.1-201ENST00000538229 291 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF3O43395 RN7SL703P-201ENST00000578485 302 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 MTND1P15-201ENST00000579262 949 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 AC006566.1-201ENST00000608943 513 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 AC005332.10-201ENST00000612725 619 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.46□□□□□ -1.7
PRPF3O43395 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
PRPF3O43395 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF3O43395 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF3O43395 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF3O43395 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PRPF3O43395 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF3O43395 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF3O43395 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF3O43395 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PRPF3O43395 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF3O43395 RNU6-1284P-201ENST00000363701 100 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.45□□□□□ -1.7
PRPF3O43395 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 RNU6-76P-201ENST00000384060 104 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 RPS3AP24-201ENST00000407896 734 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 SNORA3.3-201ENST00000408712 125 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 RN7SKP263-201ENST00000411194 309 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 PIGFP2-201ENST00000421400 651 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 MTATP6P4-201ENST00000427725 675 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 FTH1P6-201ENST00000430768 320 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF3O43395 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 AL356535.1-201ENST00000440335 398 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF3O43395 MTCYBP1-201ENST00000454315 1119 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 TPT1P7-201ENST00000458300 517 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AC069499.1-201ENST00000489433 509 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 SNORA31.8-201ENST00000516327 108 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 Vault.3-201ENST00000516676 95 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 SCARNA14-201ENST00000516903 136 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF3O43395 AP003392.2-201ENST00000527269 208 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF3O43395 SNRPGP16-201ENST00000533275 226 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AC022880.1-201ENST00000534017 973 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms