Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL356131.1-201ENST00000405826 414 ntBASIC2.75□□□□□ -1.97
LSM1O15116 RPS7P9-201ENST00000414704 586 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM1O15116 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.75□□□□□ -1.97
LSM1O15116 RPL7P37-201ENST00000425095 738 ntBASIC2.75□□□□□ -1.97
LSM1O15116 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 MTCYBP11-201ENST00000447254 1109 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.75□□□□□ -1.97
LSM1O15116 AC026410.2-201ENST00000460281 156 ntBASIC2.75□□□□□ -1.97
LSM1O15116 RPL31P60-201ENST00000478450 367 ntBASIC2.75□□□□□ -1.97
LSM1O15116 RPL30P5-201ENST00000494923 336 ntBASIC2.75□□□□□ -1.97
LSM1O15116 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LSM1O15116 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 MTCO3P27-201ENST00000514397 196 ntBASIC2.75□□□□□ -1.97
LSM1O15116 RNU6-798P-201ENST00000516912 103 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AP003355.1-201ENST00000518956 587 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AP003102.1-201ENST00000525638 661 ntBASIC2.75□□□□□ -1.97
LSM1O15116 MTCO3P15-201ENST00000526563 574 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AP002404.1-201ENST00000532005 451 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 AC107016.2-201ENST00000547968 190 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 HMGB1P14-201ENST00000557424 591 ntBASIC2.75□□□□□ -1.97
LSM1O15116 HSPE1P3-201ENST00000559254 309 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AC093510.2-201ENST00000562820 896 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AMZ2P1-203ENST00000565833 850 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM1O15116 OR4K8P-201ENST00000578842 1048 ntBASIC2.75□□□□□ -1.97
LSM1O15116 MIR1254-2-201ENST00000579553 63 ntBASIC2.75□□□□□ -1.97
LSM1O15116 MIR3944-201ENST00000581277 108 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM1O15116 AL031176.1-201ENST00000604554 466 ntBASIC2.75□□□□□ -1.97
LSM1O15116 AC090132.2-201ENST00000615881 347 ntBASIC2.75□□□□□ -1.97
LSM1O15116 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.75□□□□□ -1.97
LSM1O15116 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.75□□□□□ -1.97
LSM1O15116 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LSM1O15116 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LSM1O15116 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM1O15116 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LSM1O15116 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM1O15116 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LSM1O15116 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LSM1O15116 RNU5B-4P-201ENST00000363508 111 ntBASIC2.74□□□□□ -1.97
LSM1O15116 SNORA25.6-201ENST00000364121 118 ntBASIC2.74□□□□□ -1.97
LSM1O15116 SNORA38.1-201ENST00000364172 131 ntBASIC2.74□□□□□ -1.97
LSM1O15116 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.74□□□□□ -1.97
LSM1O15116 AL365496.1-201ENST00000426885 215 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AL590233.1-201ENST00000430017 456 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AC093156.1-201ENST00000440382 670 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM1O15116 AL358232.1-201ENST00000448030 501 ntBASIC2.74□□□□□ -1.97
LSM1O15116 RPS15AP17-201ENST00000470598 390 ntBASIC2.74□□□□□ -1.97
LSM1O15116 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM1O15116 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM1O15116 AC022483.1-201ENST00000514020 567 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AC009812.2-201ENST00000517657 457 ntBASIC2.74□□□□□ -1.97
LSM1O15116 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM1O15116 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM1O15116 HSPA8P13-201ENST00000523715 472 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM1O15116 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM1O15116 AC138915.2-201ENST00000569776 97 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AC009163.5-201ENST00000575421 637 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AC006539.2-201ENST00000601729 572 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AL356575.1-201ENST00000603008 283 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AL161734.1-201ENST00000609720 557 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AC011330.2-201ENST00000621680 635 ntBASIC2.74□□□□□ -1.97
LSM1O15116 AC110079.1-202ENST00000635213 138 ntBASIC2.74□□□□□ -1.97
LSM1O15116 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LSM1O15116 AC096644.4-201ENST00000563417 2912 ntBASIC2.73□□□□□ -1.97
LSM1O15116 AC092593.1-201ENST00000515413 1815 ntBASIC2.73□□□□□ -1.97
LSM1O15116 ZNF271P-202ENST00000465539 1970 ntBASIC2.73□□□□□ -1.97
LSM1O15116 AC097714.1-201ENST00000511272 1647 ntBASIC2.73□□□□□ -1.97
LSM1O15116 SNRPEP3-201ENST00000338402 276 ntBASIC2.73□□□□□ -1.97
LSM1O15116 RNU6-216P-201ENST00000363282 104 ntBASIC2.73□□□□□ -1.97
LSM1O15116 RNU6-270P-201ENST00000364131 105 ntBASIC2.73□□□□□ -1.97
LSM1O15116 AL079342.2-201ENST00000403367 482 ntBASIC2.73□□□□□ -1.97
LSM1O15116 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM1O15116 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM1O15116 CR769767.1-201ENST00000436337 346 ntBASIC2.73□□□□□ -1.97
LSM1O15116 ARF4P4-201ENST00000439608 520 ntBASIC2.73□□□□□ -1.97
LSM1O15116 AC093155.1-201ENST00000440164 826 ntBASIC2.73□□□□□ -1.97
LSM1O15116 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.73□□□□□ -1.97
LSM1O15116 RPL39P6-201ENST00000448289 150 ntBASIC2.73□□□□□ -1.97
LSM1O15116 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.73□□□□□ -1.97
LSM1O15116 AC003982.1-202ENST00000469928 248 ntBASIC2.73□□□□□ -1.97
LSM1O15116 KC877373.1-201ENST00000479066 408 ntBASIC2.73□□□□□ -1.97
LSM1O15116 NAMPTP2-201ENST00000505629 1115 ntBASIC2.73□□□□□ -1.97
LSM1O15116 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.73□□□□□ -1.97
LSM1O15116 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LSM1O15116 AL359273.1-201ENST00000510918 627 ntBASIC2.73□□□□□ -1.97
LSM1O15116 TBCAP3-201ENST00000512475 312 ntBASIC2.73□□□□□ -1.97
LSM1O15116 SNORA26.10-201ENST00000516427 141 ntBASIC2.73□□□□□ -1.97
LSM1O15116 RNA5SP367-201ENST00000516557 118 ntBASIC2.73□□□□□ -1.97
LSM1O15116 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms