Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.89□□□□□ -2.11
SDCBPO00560 AL049873.1-201ENST00000480540 376 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.89□□□□□ -2.11
SDCBPO00560 NAMPTP2-201ENST00000505629 1115 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC114781.4-201ENST00000513707 639 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 MTCYBP20-201ENST00000524239 1129 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SDCBPO00560 AC121758.2-201ENST00000553271 193 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.89□□□□□ -2.11
SDCBPO00560 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.89□□□□□ -2.11
SDCBPO00560 FAM60BP-201ENST00000578364 658 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC103810.1-201ENST00000579873 453 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
SDCBPO00560 AL355812.1-201ENST00000603215 216 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC106028.5-201ENST00000610332 395 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC006329.2-201ENST00000611491 394 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC009159.1-201ENST00000618386 642 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC040168.1-201ENST00000623594 991 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC110079.1-202ENST00000635213 138 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 AC068620.4-201ENST00000636730 1182 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 SEC63P2-201ENST00000503863 1939 ntBASIC1.89□□□□□ -2.11
SDCBPO00560 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.89□□□□□ -2.11
SDCBPO00560 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SDCBPO00560 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SDCBPO00560 AC099654.7-201ENST00000635788 2127 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SDCBPO00560 AC025263.3-201ENST00000622965 1396 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.88□□□□□ -2.11
SDCBPO00560 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.88□□□□□ -2.11
SDCBPO00560 AC135776.4-201ENST00000624300 1904 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SDCBPO00560 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SDCBPO00560 AL139276.1-201ENST00000311910 1001 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 RNA5SP139-201ENST00000364340 117 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 U3.12-201ENST00000364498 214 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 AC083799.1-201ENST00000366451 910 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 MIR649-201ENST00000384843 97 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 AL356320.2-201ENST00000417263 507 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 AC096632.1-201ENST00000427395 310 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.88□□□□□ -2.11
SDCBPO00560 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.88□□□□□ -2.11
SDCBPO00560 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.88□□□□□ -2.11
SDCBPO00560 AC010099.1-201ENST00000455434 375 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 AC103783.1-201ENST00000520506 373 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.88□□□□□ -2.11
SDCBPO00560 AP000867.2-201ENST00000532468 320 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 AC025918.2-201ENST00000558683 763 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 AP005205.1-201ENST00000563503 508 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 MIR5007-201ENST00000583098 95 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 MIR6895-201ENST00000613497 78 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.88□□□□□ -2.11
SDCBPO00560 AP006248.3-201ENST00000623580 594 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.88□□□□□ -2.11
SDCBPO00560 AC130650.2-201ENST00000618736 2403 ntBASIC1.88□□□□□ -2.11
SDCBPO00560 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.87□□□□□ -2.11
SDCBPO00560 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
SDCBPO00560 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.87□□□□□ -2.11
SDCBPO00560 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SDCBPO00560 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SDCBPO00560 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.87□□□□□ -2.11
SDCBPO00560 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SDCBPO00560 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
SDCBPO00560 MIR627-201ENST00000384979 97 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.87□□□□□ -2.11
SDCBPO00560 RPS15AP38-201ENST00000413110 372 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.87□□□□□ -2.11
SDCBPO00560 AC018634.1-201ENST00000437554 401 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.87□□□□□ -2.11
SDCBPO00560 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.87□□□□□ -2.11
SDCBPO00560 OR6K5P-201ENST00000447050 945 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 DPPA3P1-201ENST00000448050 469 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.87□□□□□ -2.11
SDCBPO00560 BX248409.1-201ENST00000455497 255 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 CABYRP1-201ENST00000465493 1045 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 PABPC1P3-201ENST00000469174 459 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 RPL23AP70-201ENST00000483361 460 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.87□□□□□ -2.11
SDCBPO00560 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.87□□□□□ -2.11
SDCBPO00560 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.87□□□□□ -2.11
SDCBPO00560 RNU6-416P-201ENST00000516265 103 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 MTCO1P47-201ENST00000523889 1271 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 MED28P6-201ENST00000558776 231 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AC009097.3-201ENST00000563557 1018 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 MIR3162-201ENST00000581818 82 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AC090616.3-201ENST00000582184 217 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 BNIP3P4-201ENST00000604946 565 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AC007938.3-201ENST00000604965 623 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AL121917.1-203ENST00000605534 577 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AC013562.2-201ENST00000611632 603 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AL163051.2-201ENST00000618976 735 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 AC073569.3-201ENST00000619055 682 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms