| BCL9 | O00512 | JMJD1C-210 | ENST00000542921 | 8149 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | RNA5SP391-201 | ENST00000363456 | 119 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AL390198.1-201 | ENST00000376445 | 320 nt | TSL 2 BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | MIR489-201 | ENST00000384923 | 84 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | MIR518E-201 | ENST00000385252 | 88 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | RNU6ATAC16P-201 | ENST00000408591 | 138 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | C1D-204 | ENST00000410067 | 736 nt | APPRIS P1 TSL 1 (best) BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AF241725.1-201 | ENST00000416182 | 480 nt | TSL 3 BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AC013402.2-201 | ENST00000424257 | 437 nt | TSL 3 BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AC124916.1-201 | ENST00000444020 | 547 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | BUD31P2-201 | ENST00000449374 | 300 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | MIR4435-2HG-213 | ENST00000451884 | 423 nt | TSL 3 BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AC011352.3-201 | ENST00000505162 | 593 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | RNU1-61P-201 | ENST00000516107 | 151 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AC021698.1-201 | ENST00000524858 | 716 nt | TSL 3 BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | MTND4LP24-201 | ENST00000572277 | 291 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AP005433.1-201 | ENST00000582939 | 620 nt | TSL 2 BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AL353811.1-201 | ENST00000602851 | 736 nt | TSL 5 BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AC006249.1-201 | ENST00000621223 | 471 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | AC002546.1-201 | ENST00000588041 | 2504 nt | BASIC | 2.55 | □□□□□ -2 | | |
| BCL9 | O00512 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AC012321.1-201 | ENST00000561622 | 1588 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | OR5AC2-201 | ENST00000358642 | 930 nt | APPRIS P1 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AL138880.1-201 | ENST00000405824 | 642 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AC093151.3-203 | ENST00000422305 | 514 nt | TSL 3 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | C1orf195-201 | ENST00000424792 | 255 nt | TSL 2 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | RPL21P66-201 | ENST00000426566 | 466 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | PSMA2P3-201 | ENST00000429685 | 675 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | TCF7L1-IT1-201 | ENST00000433581 | 458 nt | TSL 3 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | USP9YP8-201 | ENST00000441913 | 500 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AC114982.2-201 | ENST00000461396 | 358 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | LINC01846-201 | ENST00000505908 | 651 nt | TSL 5 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AC121154.1-201 | ENST00000507299 | 430 nt | TSL 3 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | RNU4-18P-201 | ENST00000516751 | 149 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AC022360.2-202 | ENST00000517308 | 407 nt | TSL 3 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AC023200.1-201 | ENST00000519660 | 651 nt | TSL 3 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AC009509.2-201 | ENST00000538640 | 429 nt | TSL 2 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | MIR5089-201 | ENST00000580047 | 84 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AC097717.1-211 | ENST00000600604 | 687 nt | TSL 5 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AL390240.1-201 | ENST00000612950 | 384 nt | BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | AL591441.2-201 | ENST00000620059 | 535 nt | TSL 5 BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | ZNF451-208 | ENST00000491832 | 3632 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.54 | □□□□□ -2 | | |
| BCL9 | O00512 | KIAA1107-201 | ENST00000370378 | 4622 nt | TSL 5 BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | OR1A2-201 | ENST00000381951 | 930 nt | APPRIS P1 BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AL021407.1-201 | ENST00000404531 | 386 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | RNU4-62P-201 | ENST00000410125 | 130 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AC003092.2-201 | ENST00000411946 | 446 nt | TSL 2 BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AC013286.1-201 | ENST00000412137 | 381 nt | TSL 5 BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | USP9YP27-201 | ENST00000418455 | 438 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AL122034.1-201 | ENST00000427609 | 497 nt | TSL 2 BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AC008067.1-203 | ENST00000430876 | 359 nt | TSL 3 BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | TAF9P1-201 | ENST00000445421 | 515 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AC004994.1-201 | ENST00000447057 | 313 nt | TSL 3 BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AL513343.1-201 | ENST00000451818 | 792 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | TAF9P2-201 | ENST00000454958 | 515 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AC079804.2-201 | ENST00000490376 | 200 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | RN7SKP277-201 | ENST00000516895 | 283 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | AC087241.2-201 | ENST00000535801 | 324 nt | BASIC | 2.53 | □□□□□ -2 | | |
| BCL9 | O00512 | LINC02516-201 | ENST00000563724 | 1771 nt | TSL 2 BASIC | 2.53 | □□□□□ -2.01 | | |
| BCL9 | O00512 | RNU6-335P-201 | ENST00000364563 | 113 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | SNORA25.9-201 | ENST00000365087 | 128 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | Y_RNA.466-201 | ENST00000384294 | 113 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AL627390.1-201 | ENST00000396055 | 340 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AL590727.1-201 | ENST00000418652 | 771 nt | TSL 2 BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | TBL1XR1-AS1-201 | ENST00000454723 | 414 nt | TSL 5 BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AL163540.1-201 | ENST00000485382 | 386 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | HMGB1P38-201 | ENST00000490557 | 577 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | RPL23AP63-201 | ENST00000498752 | 471 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | SCOC-206 | ENST00000506322 | 687 nt | APPRIS ALT1 TSL 5 BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | MLLT10P2-201 | ENST00000506434 | 249 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC107398.2-201 | ENST00000508081 | 601 nt | TSL 5 BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | RNU6-250P-201 | ENST00000516958 | 103 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | IGHVIII-5-1-201 | ENST00000523059 | 99 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC084819.1-201 | ENST00000537293 | 424 nt | TSL 1 (best) BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | RPS3AP4-201 | ENST00000555161 | 764 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC002558.3-201 | ENST00000574021 | 401 nt | TSL 3 BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | SNRPGP19-201 | ENST00000603826 | 189 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC034102.8-201 | ENST00000615146 | 484 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | MIR6864-201 | ENST00000617935 | 70 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AL358975.1-202 | ENST00000628133 | 589 nt | TSL 5 BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | ZFAND6-212 | ENST00000559775 | 1602 nt | APPRIS P1 TSL 2 BASIC | 2.52 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC093865.1-201 | ENST00000415387 | 433 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | LINC00368-201 | ENST00000422994 | 650 nt | TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC027124.2-201 | ENST00000428249 | 105 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC092473.1-201 | ENST00000441098 | 221 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | RPL34P26-201 | ENST00000445636 | 354 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AL589963.1-201 | ENST00000449282 | 727 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC092673.1-201 | ENST00000510203 | 428 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | RNU6-1073P-201 | ENST00000517182 | 106 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | SDHAF2-205 | ENST00000537782 | 559 nt | TSL 4 BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC067805.1-201 | ENST00000559344 | 470 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC011472.4-201 | ENST00000615848 | 491 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC090897.3-201 | ENST00000636973 | 1157 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | ST7-AS2-206 | ENST00000456577 | 1351 nt | TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | ZNF626-204 | ENST00000612591 | 4404 nt | APPRIS P1 TSL 5 BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC073055.1-201 | ENST00000456901 | 1621 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | CBLL1-201 | ENST00000222597 | 2003 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | AC009975.1-201 | ENST00000634588 | 2698 nt | TSL 5 BASIC | 2.51 | □□□□□ -2.01 | | |
| BCL9 | O00512 | OR6C2-202 | ENST00000641202 | 2105 nt | APPRIS P1 BASIC | 2.51 | □□□□□ -2.01 | | |