Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.24□□□□□ -1.73
FOXN3O00409 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.24□□□□□ -1.73
FOXN3O00409 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXN3O00409 YPEL5P3-201ENST00000547227 352 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 CCNG2P1-201ENST00000549521 1000 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN3O00409 AL133241.1-201ENST00000556832 487 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC009063.1-201ENST00000563342 702 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 EIF1P4-201ENST00000572664 335 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC091167.4-201ENST00000605079 184 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AL034351.1-201ENST00000605288 668 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC109347.2-201ENST00000610220 349 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AL355073.2-201ENST00000612106 557 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 MIR6716-201ENST00000613413 80 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AL591424.2-201ENST00000617023 128 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN3O00409 AL136313.1-201ENST00000624804 202 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC019226.1-201ENST00000625666 515 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 PISRT1-201ENST00000626175 531 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN3O00409 LRRC77P-213ENST00000637727 880 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 MIR492-201ENST00000638676 116 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AL645937.1-201ENST00000641739 1652 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN3O00409 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 FARSBP1-201ENST00000435808 1778 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 LINC02471-203ENST00000641941 4752 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
FOXN3O00409 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 IPO8P1-201ENST00000455509 3109 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 RLIMP1-201ENST00000339626 1680 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN3O00409 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXN3O00409 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN3O00409 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXN3O00409 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXN3O00409 RPL32P3-201ENST00000359025 275 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 RNU5A-8P-201ENST00000364102 114 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 RNY3P13-201ENST00000365542 102 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
FOXN3O00409 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
FOXN3O00409 RAB28P1-201ENST00000411517 641 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 RPL7AP73-201ENST00000413490 353 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.23□□□□□ -1.73
FOXN3O00409 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN3O00409 AC092017.2-201ENST00000427600 362 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AC104850.1-201ENST00000435940 476 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 RABEPKP1-201ENST00000440529 1026 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN3O00409 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN3O00409 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN3O00409 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.23□□□□□ -1.73
FOXN3O00409 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.23□□□□□ -1.73
FOXN3O00409 RPL7P19-201ENST00000469948 618 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 RPS15AP36-201ENST00000492022 382 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 RPL7P23-201ENST00000493874 747 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN3O00409 RNA5SP179-201ENST00000517284 121 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 OR5G4P-201ENST00000525251 760 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN3O00409 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN3O00409 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.23□□□□□ -1.73
FOXN3O00409 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN3O00409 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN3O00409 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN3O00409 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN3O00409 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXN3O00409 BNIP3P5-201ENST00000562290 498 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AP001330.4-201ENST00000604350 154 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXN3O00409 AC091304.9-201ENST00000612091 226 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AC013476.2-201ENST00000614456 459 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AC072046.2-201ENST00000618366 268 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AL731566.2-201ENST00000618971 317 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AL353748.2-201ENST00000622148 471 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AC243312.2-201ENST00000623340 601 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 AC068880.5-201ENST00000624331 290 ntBASIC4.23□□□□□ -1.73
FOXN3O00409 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXN3O00409 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN3O00409 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN3O00409 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN3O00409 AP001350.1-201ENST00000601906 1524 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 BDP1P-201ENST00000582658 1990 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN3O00409 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN3O00409 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN3O00409 RNU5E-1-201ENST00000362477 120 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 RNU5A-6P-201ENST00000384136 116 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 RNU2-8P-201ENST00000410727 190 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 RNU4-6P-201ENST00000410804 122 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 RPL21P66-201ENST00000426566 466 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC010975.2-201ENST00000427781 588 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN3O00409 ATP5HP2-201ENST00000433885 485 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AL356535.1-201ENST00000440335 398 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 RANP8-201ENST00000444720 713 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 NANOGNBP1-201ENST00000448444 480 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms