Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AP004217.1-201ENST00000480579 346 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.06□□□□□ -1.92
PDLIM1O00151 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.06□□□□□ -1.92
PDLIM1O00151 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 AC006499.2-201ENST00000513470 337 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.06□□□□□ -1.92
PDLIM1O00151 DUXAP2-201ENST00000519198 589 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AP001804.3-201ENST00000525146 880 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 DEFB131D-201ENST00000526803 184 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PDLIM1O00151 AC018630.1-201ENST00000541376 925 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 SETP7-201ENST00000552169 453 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PDLIM1O00151 AC015917.1-201ENST00000579654 510 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.06□□□□□ -1.92
PDLIM1O00151 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AP000484.1-201ENST00000620067 1252 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 SNORD39.4-201ENST00000620099 78 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AL360181.4-201ENST00000621752 134 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AC006111.3-201ENST00000622137 383 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 AL356585.4-201ENST00000623078 1229 ntBASIC3.06□□□□□ -1.92
PDLIM1O00151 OR4G11P-202ENST00000642116 1414 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDLIM1O00151 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDLIM1O00151 RPL23AP57-201ENST00000332361 466 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 RNU1-109P-201ENST00000383960 147 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 MIR490-201ENST00000384865 128 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 CYCSP45-201ENST00000402289 315 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AL356131.1-201ENST00000405826 414 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 RNA5SP492-201ENST00000411330 114 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDLIM1O00151 HMGB1P49-201ENST00000418882 569 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AL137014.1-201ENST00000420490 1226 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM1O00151 SDCBPP1-201ENST00000440192 890 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 RABEPKP1-201ENST00000440529 1026 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 PRDX3P3-201ENST00000447765 522 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 ARPC3P5-201ENST00000448802 534 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.05□□□□□ -1.92
PDLIM1O00151 Z82190.1-201ENST00000454534 490 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 RPL9P33-201ENST00000484311 566 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC096751.1-202ENST00000502691 1067 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AIG1P1-201ENST00000503376 148 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM1O00151 SLC25A15P5-201ENST00000508033 253 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC093281.2-201ENST00000510153 597 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC025881.1-201ENST00000518851 512 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
PDLIM1O00151 CR383656.7-201ENST00000548164 174 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AL391156.1-201ENST00000554965 554 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM1O00151 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM1O00151 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM1O00151 VN1R82P-201ENST00000601481 356 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM1O00151 AP001330.4-201ENST00000604350 154 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC008962.1-201ENST00000605729 304 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AL591516.1-201ENST00000611326 274 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AL110115.1-201ENST00000614396 364 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 AC127502.3-201ENST00000636170 1206 ntBASIC3.05□□□□□ -1.92
PDLIM1O00151 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.05□□□□□ -1.92
PDLIM1O00151 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM1O00151 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
PDLIM1O00151 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM1O00151 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM1O00151 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 MIR7-3-201ENST00000384898 110 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 RNU6-952P-201ENST00000391164 108 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 RNU6-757P-201ENST00000410334 100 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM1O00151 MRPL50P2-201ENST00000416821 482 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 RPL7P30-201ENST00000420888 709 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM1O00151 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM1O00151 DUTP6-201ENST00000425573 462 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 YME1L1P1-201ENST00000429435 297 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM1O00151 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM1O00151 MTCYBP45-201ENST00000435243 565 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 MTCYBP34-201ENST00000439552 670 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AL353691.1-201ENST00000451332 387 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM1O00151 AC008155.2-201ENST00000464337 397 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AC025518.1-201ENST00000479856 347 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AC021146.8-201ENST00000507455 733 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM1O00151 MTND5P4-201ENST00000514978 288 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.04□□□□□ -1.92
PDLIM1O00151 ERHP1-201ENST00000523006 310 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM1O00151 MTCO2P15-201ENST00000532655 656 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 SNRPGP16-201ENST00000533275 226 ntBASIC3.04□□□□□ -1.92
PDLIM1O00151 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM1O00151 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM1O00151 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PDLIM1O00151 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms