Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 KATNBL1P4-201ENST00000503545 918 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC111193.1-201ENST00000504097 155 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC104057.1-201ENST00000515547 497 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 RNA5SP356-201ENST00000515972 94 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 OR4V1P-201ENST00000525394 1140 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 SETP7-201ENST00000552169 453 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC023158.1-201ENST00000561632 1025 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AL355877.2-201ENST00000603670 358 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC024023.1-201ENST00000624530 922 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 AC116618.1-201ENST00000634617 774 ntBASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.12□□□□□ -2.23
CHKB-CPT1BH3BT56 MTCO1P12-201ENST00000414273 1543 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR422A-201ENST00000362286 90 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-859P-201ENST00000362728 107 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 U8.3-201ENST00000363321 132 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-1226P-201ENST00000384317 107 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 SNORA48.3-201ENST00000391081 134 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AL592148.1-201ENST00000413568 445 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 RPS3AP9-201ENST00000417027 792 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AL109913.1-201ENST00000421173 514 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC096920.1-201ENST00000423991 241 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC093106.2-201ENST00000428212 385 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 MTCYBP45-201ENST00000435243 565 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC104978.1-201ENST00000449387 391 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 RPS29P33-201ENST00000456717 146 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 MTND4LP3-201ENST00000468320 276 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL36AP51-201ENST00000487216 318 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL30P5-201ENST00000494923 336 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC113398.2-201ENST00000507630 558 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC096745.1-201ENST00000509945 370 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-928P-201ENST00000516876 104 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 HMGN1P28-201ENST00000521340 364 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 C1GALT1P3-201ENST00000522049 819 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 HSBP1P1-201ENST00000555205 166 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 EIF5A2P1-201ENST00000564027 460 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC068135.2-201ENST00000569293 1028 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR4529-201ENST00000578110 78 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC013244.1-201ENST00000604279 193 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC067959.1-201ENST00000604334 379 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC135803.1-201ENST00000608748 565 ntBASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
CHKB-CPT1BH3BT56 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 ZNF702P-202ENST00000434269 1966 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 RNA5SP363-201ENST00000365072 115 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL139039.1-201ENST00000401900 692 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL161449.1-201ENST00000414531 1199 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL512649.1-201ENST00000428997 581 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 FCF1P1-201ENST00000432690 571 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC007389.2-201ENST00000434630 306 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC004866.2-201ENST00000438285 481 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 OR2AF1P-201ENST00000454899 889 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC104687.1-201ENST00000485829 412 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC008885.2-201ENST00000509506 930 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC026403.1-201ENST00000518938 295 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC008676.3-201ENST00000521237 435 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AC007224.1-201ENST00000564410 144 ntBASIC1.1□□□□□ -2.23
CHKB-CPT1BH3BT56 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms