Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC110774.1-201ENST00000623567 2018 ntBASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49D1C9J1S8 AP001350.1-201ENST00000601906 1524 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 FAM133CP-201ENST00000332869 704 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-251P-201ENST00000363235 104 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-560P-201ENST00000364007 108 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 SNORA38.1-201ENST00000364172 131 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 SNORA51.12-201ENST00000384448 134 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC016769.3-201ENST00000396562 315 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 BTBD10P2-201ENST00000404779 676 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC073264.1-201ENST00000411508 416 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AL593851.1-201ENST00000426171 157 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 RPL36AP6-201ENST00000435770 321 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 UBE2D3P1-201ENST00000436669 444 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 HIGD1AP11-201ENST00000438361 280 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC112653.1-201ENST00000443851 386 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 ART2BP-201ENST00000453501 499 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC034244.1-201ENST00000507687 207 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC010587.2-201ENST00000511727 448 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 MTATP6P15-201ENST00000527233 835 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC090695.1-201ENST00000561269 1222 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC093519.1-201ENST00000566109 298 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 MTCYBP28-201ENST00000566728 1132 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC025588.3-201ENST00000604182 274 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC006270.3-201ENST00000605967 1036 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC092650.2-201ENST00000619984 902 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AL607023.1-201ENST00000620045 248 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC120349.2-201ENST00000625002 298 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 AC096644.4-201ENST00000563417 2912 ntBASIC2.78□□□□□ -1.96
TRIM49D1C9J1S8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.78□□□□□ -1.97
TRIM49D1C9J1S8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 SNRPEP3-201ENST00000338402 276 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-1066P-201ENST00000363573 105 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-263P-201ENST00000363811 107 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 TAS2R15P-201ENST00000390674 928 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 ARF4P3-201ENST00000397387 509 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 SNRPEP2-201ENST00000397592 279 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 RNU2-28P-201ENST00000410457 189 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 RAP1BP1-201ENST00000412709 553 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 MTCYBP24-201ENST00000420387 1106 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 USP9YP26-201ENST00000421008 661 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AL139421.1-201ENST00000423010 169 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC233981.1-201ENST00000423224 461 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC022018.1-201ENST00000430685 241 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 RPL23AP74-201ENST00000437246 471 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 USP9YP22-201ENST00000438971 294 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC013828.1-201ENST00000481845 158 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC079395.1-201ENST00000510981 262 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 SNORA74D-201ENST00000516404 141 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-759P-201ENST00000516740 103 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC087373.1-201ENST00000524920 491 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AL354943.1-201ENST00000572103 781 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms