Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 CASP1P1-201ENST00000526345 212 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AC135628.1-201ENST00000568867 534 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 DEFB122-202ENST00000569013 197 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 MIR548Y-201ENST00000582739 110 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 GLUD1P4-201ENST00000590914 418 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AL160281.1-201ENST00000605307 311 ntBASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV1-2A0A0B4J238 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 RNU6-185P-201ENST00000384421 107 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 MIR9-3-201ENST00000385084 90 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 RNA5SP252-201ENST00000391131 119 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 DPH3P2-201ENST00000422618 250 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 RPL7P37-201ENST00000425095 738 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC096632.1-201ENST00000427395 310 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 GPM6BP3-201ENST00000442797 145 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AL031183.1-201ENST00000457667 207 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 HMGN1P8-201ENST00000463578 288 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 RPL23AP70-201ENST00000483361 460 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC104687.1-201ENST00000485829 412 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 HMGB3P17-201ENST00000504195 649 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 RNA5SP182-201ENST00000516064 82 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AP002812.4-201ENST00000532139 286 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AP002770.2-201ENST00000543613 532 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC093014.1-201ENST00000548926 724 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 SETP7-201ENST00000552169 453 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC106791.2-201ENST00000604680 391 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC009570.1-201ENST00000609599 745 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AC068944.2-201ENST00000610373 403 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AL138880.2-201ENST00000616214 239 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 AL359893.1-201ENST00000447628 1580 ntBASIC1.46□□□□□ -2.18
TRAV1-2A0A0B4J238 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC011460.1-201ENST00000636268 1834 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 Y_RNA.333-201ENST00000365274 102 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 RNA5SP88-201ENST00000365560 109 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 TAS2R15P-201ENST00000390674 928 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 U3.26-201ENST00000391236 204 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AL445529.1-201ENST00000398713 389 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 RNA5SP425-201ENST00000410336 112 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC096533.1-201ENST00000411645 353 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AL137014.1-201ENST00000420490 1226 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AL445685.2-201ENST00000422551 342 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 snoU13.4-201ENST00000458916 104 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 SETP11-201ENST00000473027 690 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC015908.1-201ENST00000478739 476 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC114322.1-201ENST00000506771 926 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 RAC1P5-201ENST00000512182 576 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC084851.1-201ENST00000529105 249 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC009127.3-201ENST00000570531 403 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 AC008739.2-201ENST00000597006 317 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 U73023.1-201ENST00000603134 700 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 U73479.1-201ENST00000618062 168 ntBASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV1-2A0A0B4J238 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AL390862.1-201ENST00000635467 1469 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 SNORA70.4-201ENST00000365509 134 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 RN7SKP223-201ENST00000410582 62 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 RPL21P32-201ENST00000419877 477 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC009237.2-201ENST00000421358 284 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 PGBD4P6-201ENST00000421501 610 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC003989.2-201ENST00000440224 169 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 IFNA11P-201ENST00000446352 526 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AL353705.4-201ENST00000449661 238 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms