Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AL606490.9-201ENST00000603331 271 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC113194.1-201ENST00000606037 500 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AL133173.2-201ENST00000614270 90 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC010149.2-201ENST00000637608 315 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 MTND5P17-201ENST00000418405 1603 ntBASIC4.83□□□□□ -1.64
CTDP1Q9Y5B0 AC024560.2-201ENST00000507981 1497 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC011266.1-201ENST00000624119 3569 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 Y_RNA.46-201ENST00000362695 102 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 RN7SKP280-201ENST00000364196 304 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 Y_RNA.481-201ENST00000384373 102 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 MIR554-201ENST00000384874 96 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 MIR3074-201ENST00000384885 81 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 RPL7P25-201ENST00000404151 721 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 RNU2-21P-201ENST00000410368 188 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 JKAMPP1-201ENST00000413804 919 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 RPL23AP74-201ENST00000437246 471 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC093019.1-201ENST00000443135 252 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 RPL23AP20-201ENST00000447965 421 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 PABPC1P3-201ENST00000469174 459 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC104563.1-201ENST00000476147 376 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 RPS29P25-201ENST00000481709 171 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC023194.1-201ENST00000493084 308 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 FTH1P9-201ENST00000513251 355 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 RNA5SP309-201ENST00000516670 106 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 RNU6-445P-201ENST00000516949 107 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC023632.4-201ENST00000517783 191 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC090151.1-201ENST00000520784 730 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 PHBP17-201ENST00000528576 541 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC053481.4-201ENST00000583164 216 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 uc_338.32-201ENST00000615087 172 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 AC019278.1-201ENST00000623516 479 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 MTCO1P24-201ENST00000515438 1558 ntBASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTDP1Q9Y5B0 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 MARK2P15-201ENST00000432204 2186 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 RPS4XP5-202ENST00000449995 1334 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 SNORD56.2-201ENST00000363242 71 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 Y_RNA.263-201ENST00000364659 114 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 RNU6-282P-201ENST00000365357 103 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 SNORD96B-201ENST00000386148 79 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 ARF4P3-201ENST00000397387 509 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AL359704.1-201ENST00000411586 781 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 MTND3P17-201ENST00000416968 344 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AL513185.2-201ENST00000425543 193 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC104850.1-201ENST00000435940 476 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 HMGB3P12-201ENST00000438745 556 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 FAM103A2P-201ENST00000444122 354 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 PMCHL2-203ENST00000457791 237 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 RNA5SP246-201ENST00000458909 119 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AP001025.2-201ENST00000490908 477 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 RNU6-714P-201ENST00000516963 103 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC022616.6-201ENST00000520479 119 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC022861.1-201ENST00000522981 663 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 CENPUP1-201ENST00000526649 1202 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC074050.1-201ENST00000563247 211 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC011468.4-201ENST00000603942 409 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC055876.5-201ENST00000605667 259 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 RMST_9.1-201ENST00000619945 193 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms