Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.31□□□□□ -1.88
KIF3AQ9Y496 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
KIF3AQ9Y496 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AL512633.1-201ENST00000399931 655 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 MTCO1P3-201ENST00000429327 192 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AC004866.2-201ENST00000438285 481 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AL671855.1-201ENST00000446875 1203 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AC079776.3-201ENST00000450665 370 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AC010625.1-201ENST00000511296 403 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 SCARNA13-201ENST00000516672 275 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 OR5AK1P-201ENST00000524837 922 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 MIR3670-2-201ENST00000582974 65 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 MIR3670-1-201ENST00000584160 65 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 MIR3670-3-201ENST00000584855 65 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 MIR3670-4-201ENST00000612260 65 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AL355493.4-201ENST00000618530 292 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AC010975.3-201ENST00000618727 978 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AC006249.1-201ENST00000621223 471 ntBASIC3.3□□□□□ -1.88
KIF3AQ9Y496 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.3□□□□□ -1.88
KIF3AQ9Y496 AC092593.1-201ENST00000515413 1815 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 RNU6-1155P-201ENST00000363554 107 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 MIR483-201ENST00000385070 76 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AL136372.1-201ENST00000403060 228 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AL079342.2-201ENST00000403367 482 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 HMGN2P35-201ENST00000412164 270 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 RAP1BP1-201ENST00000412709 553 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AP000949.1-201ENST00000438328 629 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 PTGES3P1-201ENST00000439531 483 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AC005297.2-201ENST00000450430 606 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 USP9YP34-201ENST00000453983 808 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 SNORA70.16-201ENST00000516390 95 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 NDUFS5P6-201ENST00000529136 295 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 GLUD1P4-201ENST00000590914 418 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 HSPE1P7-201ENST00000604681 321 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AC124016.2-201ENST00000610058 665 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AL356585.4-201ENST00000623078 1229 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 AC079228.1-201ENST00000624774 1049 ntBASIC3.29□□□□□ -1.88
KIF3AQ9Y496 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
KIF3AQ9Y496 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 SNORA48.2-201ENST00000390926 124 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 RNA5SP492-201ENST00000411330 114 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 CYCSP32-201ENST00000440548 321 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 RAC1P7-201ENST00000445367 377 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 SNRPGP6-201ENST00000451124 220 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AP000705.1-201ENST00000454567 350 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 RNU6-467P-201ENST00000517027 110 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 RNU6-1261P-201ENST00000517194 104 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 HSPE1P20-201ENST00000538133 289 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 ZNF861P-201ENST00000588126 639 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC245036.5-201ENST00000596330 847 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC068620.3-201ENST00000602749 560 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 AC012443.1-201ENST00000605605 231 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 MKKS-204ENST00000639674 192 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.28□□□□□ -1.88
KIF3AQ9Y496 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.28□□□□□ -1.88
KIF3AQ9Y496 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KIF3AQ9Y496 Y_RNA.25-201ENST00000362528 102 ntBASIC3.27□□□□□ -1.89
KIF3AQ9Y496 RNU6-236P-201ENST00000363886 106 ntBASIC3.27□□□□□ -1.89
KIF3AQ9Y496 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.27□□□□□ -1.89
KIF3AQ9Y496 RNU2-42P-201ENST00000410697 113 ntBASIC3.27□□□□□ -1.89
KIF3AQ9Y496 ATG3P1-201ENST00000419507 911 ntBASIC3.27□□□□□ -1.89
KIF3AQ9Y496 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.27□□□□□ -1.89
KIF3AQ9Y496 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.27□□□□□ -1.89
KIF3AQ9Y496 MTCYBP42-201ENST00000444653 1130 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms