Protein–RNA interactions for Protein: Q9Y3X0

CCDC9, Coiled-coil domain-containing protein 9, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9Q9Y3X0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 AC005951.2-201ENST00000576282 495 ntBASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 MIR3200-201ENST00000580767 85 ntBASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 AC080078.2-201ENST00000603766 501 ntBASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 AL136363.1-201ENST00000605349 337 ntBASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 SNORA51-201ENST00000606420 132 ntBASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC9Q9Y3X0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 OR4G2P-202ENST00000641004 1759 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 Y_RNA.41-201ENST00000362646 102 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 RNU6-181P-201ENST00000363225 107 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 RNU6-169P-201ENST00000365336 107 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 MIR514A1-201ENST00000385133 98 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 U3.35-201ENST00000408405 208 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AC073464.1-201ENST00000429823 534 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 GPR143P-201ENST00000434155 205 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 RPL35AP21-201ENST00000437667 333 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AC073587.1-201ENST00000447093 876 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 RPS20P20-201ENST00000460498 340 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AC007182.2-201ENST00000489251 402 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 SNORA70.16-201ENST00000516390 95 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 RNU6-445P-201ENST00000516949 107 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 CYCSP40-201ENST00000575927 294 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 MIR4298-201ENST00000584380 73 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 DEFB131E-202ENST00000602581 683 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL670379.6-201ENST00000603753 252 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL670379.11-201ENST00000604059 253 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AC008162.1-201ENST00000604718 254 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL670379.1-201ENST00000604752 252 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL670379.5-201ENST00000605253 252 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL670379.12-201ENST00000605291 253 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL670379.8-201ENST00000605353 252 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL670379.7-201ENST00000605823 252 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL031666.3-201ENST00000609320 1006 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL592295.2-201ENST00000612578 206 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL357559.1-201ENST00000622228 274 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 CR848007.1-201ENST00000442354 1699 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 AL133383.2-201ENST00000622958 2336 ntBASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC9Q9Y3X0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 SNORA73.2-201ENST00000364946 201 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 RPS20P14-201ENST00000412545 360 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 RAC1P6-201ENST00000423911 575 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 OR2B8P-201ENST00000432841 938 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AL451074.3-201ENST00000437709 472 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 RN7SL432P-201ENST00000484057 298 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC023194.1-201ENST00000493084 308 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AP001086.1-201ENST00000494882 321 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 HMGB1P29-201ENST00000505659 499 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 RNU6-410P-201ENST00000517006 107 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 RNU6-1220P-201ENST00000517126 108 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 GLUD1P4-201ENST00000590914 418 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AC019176.2-201ENST00000611579 315 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AL121772.2-201ENST00000614331 297 ntBASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCDC9Q9Y3X0 AL158209.2-201ENST00000619266 216 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms