Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RPL37P10-201ENST00000412884 288 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC245054.2-201ENST00000415639 319 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 GPM6BP2-201ENST00000432046 144 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 RPS20P1-201ENST00000434853 354 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 GPM6BP1-201ENST00000446387 144 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC090804.1-201ENST00000448870 490 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 RPS15AP27-201ENST00000449183 343 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC104634.1-201ENST00000452720 462 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 SCARNA18-201ENST00000459004 134 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 snoU13.3-201ENST00000459441 104 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC116533.1-201ENST00000459748 321 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC008481.1-201ENST00000463278 396 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC025164.1-201ENST00000496249 478 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AP006289.1-201ENST00000538089 277 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AL110118.1-201ENST00000553543 400 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC023043.2-201ENST00000589678 1026 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC004696.1-201ENST00000614345 607 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 MIR6758-201ENST00000620653 63 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AC068870.1-201ENST00000563737 2455 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 AL034549.2-201ENST00000618285 3373 ntBASIC4.27□□□□□ -1.73
CDC42EP3Q9UKI2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC100757.1-201ENST00000616872 1835 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 XIAPP3-201ENST00000312918 795 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC011155.1-201ENST00000316512 456 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC079741.1-201ENST00000321498 212 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 Y_RNA.135-201ENST00000363439 95 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 OR1L6-202ENST00000373684 1044 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 SNORA70E-201ENST00000384492 135 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AL360182.1-201ENST00000397433 468 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AL139397.2-201ENST00000404529 772 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RPL7P10-201ENST00000417407 739 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AL590609.2-201ENST00000421430 368 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AL391219.1-201ENST00000422570 483 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 SKA2P1-201ENST00000425592 390 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RPL19P16-201ENST00000433839 588 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AF228730.2-201ENST00000438784 848 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RPS29P10-201ENST00000439197 166 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 MTND1P17-201ENST00000448961 204 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC234775.1-201ENST00000454247 670 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RPS23P7-201ENST00000466210 444 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC010631.1-201ENST00000474150 156 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RBBP4P6-201ENST00000508098 202 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6-189P-201ENST00000516120 101 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6-1095P-201ENST00000516148 108 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 COPS8P3-201ENST00000526024 482 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AP000763.2-201ENST00000540641 163 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms