Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNF138P1-201ENST00000502765 546 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC093767.1-201ENST00000504523 156 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC026784.1-201ENST00000507986 352 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 NDUFB4P9-201ENST00000511646 388 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC024589.1-201ENST00000512207 263 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC034159.1-201ENST00000513885 583 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC022861.1-201ENST00000522981 663 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 PTP4A1P6-201ENST00000531034 478 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 YWHAQP7-201ENST00000603536 658 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC024220.1-201ENST00000603675 484 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC025588.3-201ENST00000604182 274 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC112187.2-201ENST00000604345 283 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC006566.1-201ENST00000608943 513 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC019176.2-201ENST00000611579 315 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC104010.1-201ENST00000616889 150 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC244100.1-202ENST00000621554 382 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AL445264.1-201ENST00000621719 171 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 FAM157B-203ENST00000639350 358 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC066616.2-201ENST00000559334 1481 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC011978.2-201ENST00000569835 2054 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SIX4Q9UIU6 AC032011.1-201ENST00000611703 1549 ntBASIC3.7□□□□□ -1.82
SIX4Q9UIU6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 SNORA63.1-201ENST00000362493 131 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 RNU6-297P-201ENST00000384636 107 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 BTBD10P2-201ENST00000404779 676 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 RNU6-648P-201ENST00000410190 107 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 RNU2-66P-201ENST00000410650 161 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 RPL21P32-201ENST00000419877 477 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AL357552.1-201ENST00000445254 415 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 BX276092.4-201ENST00000452056 248 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 SUMO2P2-201ENST00000456482 255 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC068305.1-201ENST00000497406 726 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 RN7SKP277-201ENST00000516895 283 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AP002453.2-201ENST00000533503 320 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 OR6C73P-201ENST00000546432 358 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC010546.1-201ENST00000569391 485 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC005771.1-201ENST00000585581 349 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC008498.1-201ENST00000613012 531 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AL355365.1-201ENST00000616480 294 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC012314.7-201ENST00000619693 93 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AC018755.4-201ENST00000619715 454 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AL603839.4-201ENST00000624658 1005 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 AL356473.1-201ENST00000406203 1408 ntBASIC3.69□□□□□ -1.82
SIX4Q9UIU6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SIX4Q9UIU6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 RNA5SP197-201ENST00000363357 119 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 RNA5SP50-201ENST00000363731 107 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 SNORD82-201ENST00000365530 70 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 MIR7-3-201ENST00000384898 110 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AL136116.1-201ENST00000403591 381 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 HMGN1P14-201ENST00000412459 517 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 BX323014.1-201ENST00000412876 237 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms