Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 RNA5SP107-201ENST00000411358 122 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 RPL7P8-201ENST00000411964 730 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC126124.2-201ENST00000413542 321 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC009237.5-201ENST00000414271 501 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 KATNBL1P6-201ENST00000453433 915 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 SNORD105B-201ENST00000458770 79 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 RPL21P104-201ENST00000464143 478 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 RPL7L1P8-201ENST00000469911 741 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 TMED11P-201ENST00000479478 690 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 RPS4XP13-201ENST00000483219 789 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC109486.1-201ENST00000486833 374 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC022483.1-201ENST00000514020 567 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC026801.2-201ENST00000515352 425 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 SETP2-201ENST00000553886 926 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC091489.2-201ENST00000566263 604 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC004223.2-201ENST00000590309 544 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC067959.1-201ENST00000604334 379 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AL451086.1-201ENST00000605596 223 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 MIR6130-201ENST00000619419 109 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC091965.5-201ENST00000624785 342 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 MIR7153-201ENST00000637758 57 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC012321.1-201ENST00000561622 1588 ntBASIC3.75□□□□□ -1.81
LIMA1Q9UHB6 AC011460.1-201ENST00000636268 1834 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AL136372.1-201ENST00000403060 228 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AL035423.1-201ENST00000420331 213 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC090960.1-201ENST00000421072 306 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 BX890604.2-201ENST00000427883 474 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 CYCSP4-201ENST00000429682 331 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC109583.1-201ENST00000432156 268 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC091390.1-201ENST00000433904 331 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 HMGB1P12-201ENST00000438594 598 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 UBE2D3P4-201ENST00000441973 436 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 GDI2P2-201ENST00000445131 608 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 EPS15P1-201ENST00000448836 336 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 RPL36AP33-201ENST00000450395 310 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 NUTF2P7-201ENST00000453086 375 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AP1S2P1-201ENST00000457344 379 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC116347.2-201ENST00000514912 523 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 MTCO1P49-201ENST00000523429 802 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 ROCK1P1-201ENST00000573767 549 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC060771.1-201ENST00000582031 164 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AF131215.7-201ENST00000602443 707 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC010591.1-201ENST00000603941 649 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AL022161.1-201ENST00000604390 213 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC103710.3-201ENST00000608157 948 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC012531.5-201ENST00000611375 151 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AL161637.1-201ENST00000622380 412 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC092125.1-201ENST00000562568 1995 ntBASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIMA1Q9UHB6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC009812.4-201ENST00000569134 1805 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 RNU6-50P-201ENST00000362356 103 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms