Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLN6Q9NWW5 BX664608.1-201ENST00000610519 487 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AC084824.4-201ENST00000620106 731 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AC011330.2-201ENST00000621680 635 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 AP000943.4-201ENST00000622912 357 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
CLN6Q9NWW5 AC096644.4-201ENST00000563417 2912 ntBASIC2.53□□□□□ -2
CLN6Q9NWW5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 Y_RNA.126-201ENST00000363382 111 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 FO393413.1-201ENST00000402892 195 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 SNORA11B-201ENST00000408175 129 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 RNA5SP120-201ENST00000410900 112 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 RAP1BP1-201ENST00000412709 553 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 MTATP6P27-201ENST00000416987 621 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC013262.1-201ENST00000426710 252 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC079776.3-201ENST00000450665 370 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 OR6K1P-201ENST00000456766 971 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 PNPLA4P1-201ENST00000458328 305 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC109464.2-201ENST00000510242 943 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 RAC1P5-201ENST00000512182 576 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC087373.1-201ENST00000524920 491 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 CASP1P1-201ENST00000526345 212 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 PSMA2P1-201ENST00000526365 646 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC087897.1-201ENST00000550134 156 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 MTND4LP25-201ENST00000570218 163 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 BNIP3P11-201ENST00000603878 563 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC005332.6-201ENST00000613178 446 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 AC090772.4-201ENST00000623599 362 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 MIR1322-201ENST00000638013 71 ntBASIC2.52□□□□□ -2.01
CLN6Q9NWW5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CLN6Q9NWW5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC138915.1-201ENST00000565427 1685 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC107982.1-201ENST00000507171 1300 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 TPTE2P4-201ENST00000258589 1605 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC097714.1-201ENST00000511272 1647 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 SNRPEP3-201ENST00000338402 276 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 ANKRD36P1-201ENST00000344424 659 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RNA5SP267-201ENST00000364893 126 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RNU6-851P-201ENST00000384565 107 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RPS3AP24-201ENST00000407896 734 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RNA5SP492-201ENST00000411330 114 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RPL19P1-201ENST00000411635 428 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC007742.1-201ENST00000425789 329 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 C1DP1-201ENST00000426049 402 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RPS20P5-201ENST00000434808 360 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 ELOCP26-201ENST00000436067 329 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 MTCYBP42-201ENST00000444653 1130 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RPL37P4-201ENST00000448908 268 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AL353691.1-201ENST00000451332 387 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 NIPA2P5-201ENST00000452282 464 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 MTCO3P11-201ENST00000455103 774 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RPS3AP43-201ENST00000479743 781 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC006445.1-201ENST00000491925 405 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 RPL21P131-201ENST00000497298 483 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 SCGB1D5P-201ENST00000515134 247 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 SCARNA13-201ENST00000516672 275 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 NDUFS5P6-201ENST00000529136 295 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AP003066.2-201ENST00000529375 555 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 MIR4637-201ENST00000582405 84 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 U73023.1-201ENST00000603134 700 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC019159.1-201ENST00000605094 187 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC008277.2-201ENST00000605196 797 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC080013.4-201ENST00000607624 649 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms