Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 AC139769.1-204ENST00000472297 1931 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 MFSD8-242ENST00000641690 4199 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 AL450326.2-201ENST00000421913 1962 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 RNU1-83P-201ENST00000363426 164 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 Y_RNA.148-201ENST00000363557 117 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 Y_RNA.255-201ENST00000364581 97 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 SNORA20.2-201ENST00000383922 131 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 RNU6-26P-201ENST00000383985 107 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 RNU6-1026P-201ENST00000384465 108 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 SNORA68.2-201ENST00000391263 128 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 MRPL42P2-201ENST00000403169 426 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 OR2AH1P-201ENST00000425717 928 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 AC239809.1-201ENST00000450470 217 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 EIF4A1P11-201ENST00000451239 222 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 AC007547.1-201ENST00000462177 490 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 AL591473.1-201ENST00000464297 313 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 AC022034.3-201ENST00000471393 478 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 RPS4XP18-201ENST00000495480 763 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 SMURF2P1-201ENST00000514992 481 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 RNU6-201P-201ENST00000517100 61 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 AC023632.4-201ENST00000517783 191 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 RNU6-988P-201ENST00000519081 107 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 TVP23BP1-201ENST00000557500 617 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 MIR4680-201ENST00000580906 66 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 MIR3118-1-201ENST00000581787 76 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 AL391813.2-201ENST00000609113 322 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 BX664608.1-201ENST00000610519 487 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 AL445363.3-201ENST00000623080 671 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG3Q9NT62 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 AC126323.6-202ENST00000568092 3511 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG3Q9NT62 BTBD10P1-201ENST00000549824 1352 ntBASIC5.66□□□□□ -1.5
ATG3Q9NT62 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG3Q9NT62 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 Y_RNA.47-201ENST00000362697 108 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 RNU6-115P-201ENST00000364310 107 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 RNU6-702P-201ENST00000364982 107 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 Y_RNA.301-201ENST00000364990 103 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 Y_RNA.339-201ENST00000365325 102 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 MIR1-2-201ENST00000384961 85 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AL592291.1-201ENST00000403830 352 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC007283.2-201ENST00000424739 197 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AL157831.1-201ENST00000426134 473 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 RPL21P89-201ENST00000444021 467 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 RPL7P15-201ENST00000461190 712 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 RPL7P22-201ENST00000466005 733 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 RNA5SP497-201ENST00000516081 97 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 HIGD1AP6-201ENST00000521833 279 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC022616.3-201ENST00000523940 148 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 uc_338.15-201ENST00000615470 191 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC009318.4-201ENST00000620496 486 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.65□□□□□ -1.5
ATG3Q9NT62 AC010149.2-201ENST00000637608 315 ntBASIC5.65□□□□□ -1.5
ATG3Q9NT62 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms