Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PPP1R11P2-201ENST00000423543 382 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 EIF4EP4-201ENST00000424916 578 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 Z93242.1-201ENST00000427102 353 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 DNAJC19P7-201ENST00000428811 344 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC234064.1-201ENST00000436312 247 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 Z82210.1-201ENST00000440037 231 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AL096803.2-201ENST00000450032 677 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 SUMO2P2-201ENST00000456482 255 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AP1S2P1-201ENST00000457344 379 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 RPS4XP10-201ENST00000465034 731 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 MRPS17P3-201ENST00000465453 385 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC072039.1-201ENST00000477611 581 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AL049874.1-201ENST00000489560 388 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 RN7SL274P-201ENST00000492268 272 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC118465.1-201ENST00000513820 1271 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 SCARNA14-201ENST00000516903 136 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 SNORA76.2-201ENST00000517095 137 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 OR4R2P-201ENST00000530815 597 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC007229.1-201ENST00000590455 412 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 AC109809.1-201ENST00000619665 545 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 MIR6834-201ENST00000622807 81 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 MTND4P27-201ENST00000450813 1354 ntBASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CDC42SE1Q9NRR8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
CDC42SE1Q9NRR8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC109315.1-201ENST00000584143 1347 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-792P-201ENST00000363490 107 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 RNU1-51P-201ENST00000365345 176 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL133264.1-201ENST00000407157 562 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 RAB9AP3-201ENST00000412737 573 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 SYF2P2-201ENST00000417620 583 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL035423.1-201ENST00000420331 213 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 FAM204CP-201ENST00000424489 642 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 HMGN2P19-201ENST00000425149 265 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL590383.1-201ENST00000428602 75 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL691517.1-201ENST00000440833 1235 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 COX6CP18-201ENST00000448769 222 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 RAB9AP1-201ENST00000449393 573 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 EEF1B2P7-201ENST00000451177 676 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 CACYBPP2-201ENST00000453625 678 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 NDUFA5P5-201ENST00000468361 342 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 RPL23AP42-201ENST00000471152 471 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 RPL36AP51-201ENST00000487216 318 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC091860.1-201ENST00000505723 432 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC023141.11-201ENST00000508864 202 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC017037.2-201ENST00000513850 890 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 SNORA70.18-201ENST00000516696 98 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AP003066.2-201ENST00000529375 555 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AP004607.5-201ENST00000532034 217 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC020978.7-201ENST00000575953 1187 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 MIR3122-201ENST00000577243 73 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms