Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.65□□□□□ -1.66
VTA1Q9NP79 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
VTA1Q9NP79 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
VTA1Q9NP79 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VTA1Q9NP79 RNU6-1120P-201ENST00000362988 108 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 U3.11-201ENST00000364476 212 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 RNU6-169P-201ENST00000365336 107 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 RNU6-432P-201ENST00000384196 109 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 CALM2P3-201ENST00000400429 449 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 RNU6ATAC-201ENST00000408749 126 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC092447.6-201ENST00000414578 210 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC092832.1-201ENST00000422934 400 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AL691449.1-201ENST00000426570 421 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 MTCO2P19-201ENST00000427513 598 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 MTND1P2-201ENST00000430604 821 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC140076.1-201ENST00000449897 361 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 FGF7P3-201ENST00000454645 303 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 AL121769.1-201ENST00000469473 401 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC012158.1-204ENST00000483430 465 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VTA1Q9NP79 ARL4AP2-201ENST00000507378 601 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 Y_RNA.693-201ENST00000516641 110 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC022616.3-201ENST00000523940 148 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC109635.3-201ENST00000529536 185 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 HSPE1P5-201ENST00000561489 272 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC234778.2-201ENST00000566241 354 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 MIR5685-201ENST00000579080 79 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 MIR4444-1-201ENST00000581696 74 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 MIR4444-2-201ENST00000584390 74 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC105224.1-201ENST00000587055 421 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 AP001330.5-201ENST00000607176 411 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC104458.1-201ENST00000608243 463 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AL391813.2-201ENST00000609113 322 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 FRG1KP-201ENST00000623592 341 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 LRRC77P-213ENST00000637727 880 ntBASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
VTA1Q9NP79 AC105074.1-201ENST00000623380 3095 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VTA1Q9NP79 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC027290.2-201ENST00000623210 18662 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VTA1Q9NP79 RNU6-263P-201ENST00000363811 107 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 RNU6-1322P-201ENST00000364309 107 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 RNU6-1283P-201ENST00000365314 105 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 RNY3P13-201ENST00000365542 102 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 Y_RNA.548-201ENST00000384656 105 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 MIR124-3-201ENST00000384866 87 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 SNORD96B-201ENST00000386148 79 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 RNA5SP171-201ENST00000391071 115 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 PTMAP2-201ENST00000397627 327 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 RNU4-65P-201ENST00000410473 140 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 RNU6-712P-201ENST00000410558 100 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AL596276.1-201ENST00000434465 418 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 RPS4XP4-201ENST00000443195 763 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC005008.1-201ENST00000456151 612 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 SNORD108-201ENST00000459332 71 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC010469.1-201ENST00000463864 576 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AL049714.1-201ENST00000466686 347 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VTA1Q9NP79 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 RPS3AP4-201ENST00000555161 764 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 SUB1P2-201ENST00000556401 297 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AL133153.1-201ENST00000557756 303 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC012182.1-201ENST00000570133 895 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC120057.2-201ENST00000571520 271 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 MIR5684-201ENST00000585074 65 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC005255.1-201ENST00000593748 216 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AP001429.1-201ENST00000602568 530 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AL138721.1-201ENST00000616756 179 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC244100.1-202ENST00000621554 382 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 MIR1321-201ENST00000637766 79 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms