Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 OR5D17P-201ENST00000531492 978 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC026333.2-201ENST00000542164 106 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AL391156.1-201ENST00000554965 554 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC078795.2-201ENST00000602835 1252 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC079089.3-201ENST00000603094 673 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC138932.5-201ENST00000617759 563 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC026585.1-201ENST00000619582 524 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AL590240.3-201ENST00000621416 943 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AL161637.1-201ENST00000622380 412 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC119674.1-207ENST00000641355 633 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 MFSD8-236ENST00000641509 4050 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 TEX21P-201ENST00000447107 1476 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC097714.1-201ENST00000511272 1647 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 SNORA31-201ENST00000362607 130 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU6-853P-201ENST00000364306 107 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU6-1119P-201ENST00000384349 108 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU6-769P-201ENST00000384407 104 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 Y_RNA.493-201ENST00000384422 102 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU6-55P-201ENST00000411092 107 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU6-954P-201ENST00000411355 107 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AL031779.1-201ENST00000415663 330 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC007742.1-201ENST00000425789 329 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 ELOCP26-201ENST00000436067 329 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RSU1P2-202ENST00000437884 485 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 CYCSP43-201ENST00000438233 310 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 SDCBPP1-201ENST00000440192 890 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 ELOCP30-201ENST00000447108 299 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RPS20P24-201ENST00000457473 361 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU7-170P-201ENST00000459303 61 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RPS4XP10-201ENST00000465034 731 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC020893.1-201ENST00000502452 580 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC093677.1-201ENST00000514414 678 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 MTCO2P32-201ENST00000514865 403 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU1-95P-201ENST00000516357 160 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU1-128P-201ENST00000516704 160 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 RNU6-1231P-201ENST00000517185 103 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 OR4P1P-201ENST00000530808 1136 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC087683.1-201ENST00000591187 441 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 TPMTP1-201ENST00000592307 737 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 BCRP9-201ENST00000605312 388 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC091965.4-201ENST00000607691 587 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC005332.10-201ENST00000612725 619 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC008498.1-201ENST00000613012 531 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 CRYM-AS1-204ENST00000637983 556 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 ZNF285B-201ENST00000561698 1767 ntBASIC3.66□□□□□ -1.82
PCDH9Q9HC56 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDH9Q9HC56 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.65□□□□□ -1.82
PCDH9Q9HC56 MTND4P5-201ENST00000435821 1374 ntBASIC3.65□□□□□ -1.82
PCDH9Q9HC56 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 RNU6-263P-201ENST00000363811 107 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AP002088.1-201ENST00000382740 395 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 SNORA40.3-201ENST00000390964 122 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AL356421.1-201ENST00000403255 413 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 ATP5A1P2-201ENST00000412323 255 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 RAB9AP3-201ENST00000412737 573 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC007899.1-201ENST00000412776 775 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms