Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-28P-201ENST00000362378 107 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RNA5SP124-201ENST00000362739 110 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 SNORD46.1-201ENST00000364139 104 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RNA5SP387-201ENST00000364226 106 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 Y_RNA.395-201ENST00000383945 109 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-1013P-201ENST00000384180 107 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 ARL5AP1-201ENST00000418991 388 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC096632.1-201ENST00000427395 310 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 Z82205.1-201ENST00000428456 297 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RPL23AP30-201ENST00000432419 501 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 FTH1P25-201ENST00000447665 469 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC073415.1-201ENST00000449240 153 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC021146.2-201ENST00000504736 556 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC114797.1-201ENST00000514003 728 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RNU4-29P-201ENST00000515943 174 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-794P-201ENST00000517261 64 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC026464.5-201ENST00000562497 722 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AP001330.4-201ENST00000604350 154 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AL080274.1-201ENST00000605565 220 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 RNU6-89P-201ENST00000606519 100 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AL132822.1-201ENST00000617063 513 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 MIR6500-201ENST00000622700 86 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 XPOTP1-201ENST00000443317 2398 ntBASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTNAP4Q9C0A0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 MTND4P1-201ENST00000457501 1466 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 MIR514A2-201ENST00000385131 88 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 MIR514A3-201ENST00000385132 88 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 RNA5SP372-201ENST00000390836 115 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AL359634.1-202ENST00000404721 284 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 PRELID3BP11-201ENST00000414230 479 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 NDUFB4P5-201ENST00000415445 361 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 RPL23AP25-201ENST00000430973 463 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 RPS20P5-201ENST00000434808 360 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 RPL23AP46-201ENST00000438548 490 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AC005229.2-201ENST00000456995 399 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 HSPD1P15-201ENST00000505573 1122 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 SNORD27.1-201ENST00000516319 72 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 Y_RNA.718-201ENST00000517110 102 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AP000907.2-201ENST00000530827 353 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AC006064.5-201ENST00000541782 248 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AL359219.2-201ENST00000555184 348 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 MIR3944-201ENST00000581277 108 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 XIAPP1-201ENST00000603162 600 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AL606490.9-201ENST00000603331 271 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 AL355598.1-201ENST00000604169 202 ntBASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.37□□□□□ -1.55
CNTNAP4Q9C0A0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNTNAP4Q9C0A0 SNORA63.1-201ENST00000362493 131 ntBASIC5.36□□□□□ -1.55
CNTNAP4Q9C0A0 RPS15AP12-201ENST00000419498 388 ntBASIC5.36□□□□□ -1.55
CNTNAP4Q9C0A0 AC108734.1-201ENST00000439549 399 ntBASIC5.36□□□□□ -1.55
CNTNAP4Q9C0A0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTNAP4Q9C0A0 HMGB1P15-201ENST00000453854 435 ntBASIC5.36□□□□□ -1.55
CNTNAP4Q9C0A0 RNU7-152P-201ENST00000458982 64 ntBASIC5.36□□□□□ -1.55
CNTNAP4Q9C0A0 Y_RNA.635-201ENST00000459041 101 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms