Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL354984.3-201ENST00000604803 325 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 Z84480.1-201ENST00000605131 311 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 AC017083.3-201ENST00000609955 700 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 MIR7703-201ENST00000620784 77 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 AL356321.1-201ENST00000621360 228 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 AC103858.2-201ENST00000621471 543 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 AP000346.3-201ENST00000622821 210 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 AC243312.2-201ENST00000623340 601 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 AL136313.1-201ENST00000624804 202 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 MIR4275-201ENST00000636486 87 ntBASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM54Q9BYV2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM54Q9BYV2 AC004925.1-201ENST00000624256 2706 ntBASIC4.15□□□□□ -1.74
TRIM54Q9BYV2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM54Q9BYV2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM54Q9BYV2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.15□□□□□ -1.74
TRIM54Q9BYV2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.74
TRIM54Q9BYV2 AL158163.1-201ENST00000603915 1649 ntBASIC4.15□□□□□ -1.74
TRIM54Q9BYV2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 Y_RNA.402-201ENST00000383972 102 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 Y_RNA.409-201ENST00000383990 98 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 Y_RNA.481-201ENST00000384373 102 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 ELOCP14-201ENST00000428070 331 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC004866.2-201ENST00000438285 481 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 ELOCP7-201ENST00000439968 331 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC005094.1-201ENST00000440420 368 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 NPM1P49-201ENST00000448027 714 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC007537.2-201ENST00000472093 511 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 MTAPP1-201ENST00000489154 819 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 ARL4AP2-201ENST00000507378 601 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 RNU7-51P-201ENST00000516560 62 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC090572.1-201ENST00000519251 160 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AL512310.1-201ENST00000548639 172 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC128657.1-201ENST00000549459 145 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC063950.1-201ENST00000552036 308 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AL512360.1-201ENST00000555346 234 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC012182.1-201ENST00000570133 895 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC105224.1-201ENST00000587055 421 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AL356218.2-201ENST00000605264 187 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 FAM27D1-201ENST00000612308 341 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AL450472.3-201ENST00000615578 367 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC007014.2-201ENST00000615581 479 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC233309.1-201ENST00000619522 751 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 FRG1KP-201ENST00000623592 341 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 MIR3688-2-201ENST00000636963 87 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 Z82217.1-201ENST00000625157 8149 ntBASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TRIM54Q9BYV2 AC016588.2-201ENST00000632484 3021 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 CR848007.1-201ENST00000442354 1699 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 MFSD8-216ENST00000641147 4009 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 HSPE1P11-201ENST00000339579 310 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RNU1-14P-201ENST00000362759 152 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 Y_RNA.159-201ENST00000363674 87 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 Y_RNA.453-201ENST00000384223 109 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 Y_RNA.573-201ENST00000384763 105 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RNU6-882P-201ENST00000391025 103 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RPS3AP24-201ENST00000407896 734 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 MIR1277-201ENST00000408536 78 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RNA5SP36-201ENST00000410197 133 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RN7SKP177-201ENST00000410567 355 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 ELOCP19-201ENST00000411919 318 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RPL21P24-201ENST00000413752 448 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RPS4XP4-201ENST00000443195 763 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC016696.1-201ENST00000446949 318 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AL162389.1-201ENST00000449233 177 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RAD23BP3-201ENST00000454157 1152 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RPS7P7-201ENST00000463499 571 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 AC006517.1-201ENST00000480485 328 ntBASIC4.14□□□□□ -1.75
TRIM54Q9BYV2 RPS26P15-201ENST00000488067 348 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms