Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RTFDC1Q9BY42 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 NDUFB4P4-201ENST00000404822 243 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 MTND6P13-201ENST00000443510 523 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 RAC1P7-201ENST00000445367 377 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 CYCSP35-201ENST00000451978 304 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 RPS24P6-201ENST00000452670 400 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 RNU7-59P-201ENST00000459101 61 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AP000873.1-201ENST00000463987 400 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 Y_RNA.672-201ENST00000516289 104 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AC007458.1-201ENST00000542812 373 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 CKS1BP3-201ENST00000600888 237 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AC068790.2-201ENST00000602601 557 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 XIAPP1-201ENST00000603162 600 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AC103591.3-201ENST00000608684 209 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AC072046.2-201ENST00000618366 268 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AL603758.1-201ENST00000618654 241 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 C2orf27A-204ENST00000623058 969 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AL159972.1-201ENST00000625150 448 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AC119674.1-207ENST00000641355 633 ntBASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.63□□□□□ -1.67
RTFDC1Q9BY42 AC095050.2-201ENST00000510748 1458 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 RNU5A-8P-201ENST00000364102 114 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 RNU6-432P-201ENST00000384196 109 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 MIR490-201ENST00000384865 128 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 RNU6-278P-201ENST00000390945 109 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 DEFB108C-201ENST00000400154 252 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 SNORA11.2-201ENST00000408318 127 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 RNU4-65P-201ENST00000410473 140 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 RNU2-62P-201ENST00000410868 191 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC078974.1-201ENST00000411597 223 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC055855.1-201ENST00000489563 579 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 RNU6-405P-201ENST00000516637 110 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC109635.4-202ENST00000531666 412 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AP004242.1-201ENST00000533701 349 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 DUXAP4-201ENST00000603046 613 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 NDUFA8P1-201ENST00000605525 367 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 SNORA62.6-201ENST00000606322 83 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AL590282.1-201ENST00000610379 1136 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 PISRT1-201ENST00000626175 531 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 MIR3651-201ENST00000630427 90 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC099654.13-201ENST00000639774 207 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC138915.3-201ENST00000562908 1389 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AC092104.1-201ENST00000497346 1441 ntBASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RTFDC1Q9BY42 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms